Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-937P-201ENST00000384325 106 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RNU6-729P-201ENST00000384399 107 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AL079342.1-201ENST00000401460 267 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AL133270.1-201ENST00000402635 279 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AL009179.1-201ENST00000406085 265 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 TMEM167AP1-201ENST00000423409 219 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC093655.2-201ENST00000425735 631 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC092573.2-201ENST00000434546 243 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC008264.1-201ENST00000447612 367 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AL162389.1-201ENST00000449233 177 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 ISCUP1-201ENST00000454451 448 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RNU6-1218P-201ENST00000458990 108 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 HMGB1P25-201ENST00000468402 607 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RPL21P6-201ENST00000479171 504 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RN7SL97P-201ENST00000486780 299 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RN7SKP66-201ENST00000516681 231 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC109479.2-201ENST00000517842 174 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC126177.5-201ENST00000549599 178 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 HNRNPCP4-201ENST00000571636 900 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 uc_338.18-201ENST00000615451 175 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 EOGT-210ENST00000615922 1931 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 SNORA67-201ENST00000384423 137 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 MIR578-201ENST00000384828 96 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 RNU6-918P-201ENST00000391219 106 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 RNU4-78P-201ENST00000410940 126 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 CYCSP10-201ENST00000417973 294 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC093162.1-201ENST00000419682 124 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC007389.2-201ENST00000434630 306 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC093414.1-201ENST00000434712 514 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 CYCSP43-201ENST00000438233 310 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 RPL23AP33-201ENST00000442301 452 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AL360271.2-201ENST00000447710 161 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 Z92846.1-201ENST00000456203 268 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC016065.2-201ENST00000514530 444 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AL442163.3-201ENST00000554110 156 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC023824.2-201ENST00000566185 400 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 RN7SL652P-201ENST00000577769 300 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 MIR5696-201ENST00000578474 85 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AP005403.1-201ENST00000579720 229 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 MIR4646-201ENST00000580775 63 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 RN7SL52P-201ENST00000584271 284 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC123912.5-201ENST00000605470 343 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 AC008962.1-201ENST00000605729 304 ntBASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FOXR1Q6PIV2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 AL109809.4-201ENST00000603520 2185 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 SNORD96B-201ENST00000386148 79 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 SNORA53-201ENST00000391141 249 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 AL109941.1-201ENST00000401925 229 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 CYCSP33-201ENST00000414485 327 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 BMS1P22-201ENST00000414726 313 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 RPL23AP81-201ENST00000455252 467 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 AC108751.2-201ENST00000469993 231 ntBASIC5.29□□□□□ -1.56
FOXR1Q6PIV2 AC022795.1-201ENST00000473808 480 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms