Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC097374.1-203ENST00000400783 485 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 BX276092.3-201ENST00000424182 230 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL451062.2-201ENST00000427515 271 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 RPL26P6-201ENST00000440913 438 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 Z98949.2-201ENST00000440996 144 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 PTMAP3-201ENST00000447474 330 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 PCMTD1P1-201ENST00000455560 355 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC105758.1-201ENST00000506038 399 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC104260.2-201ENST00000623551 3497 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 Y_RNA.39-201ENST00000362620 98 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 Y_RNA.48-201ENST00000362710 103 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-379P-201ENST00000363813 104 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 Y_RNA.314-201ENST00000365114 102 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 Y_RNA.424-201ENST00000384063 103 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 SNORA36C-201ENST00000384289 132 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 Y_RNA.534-201ENST00000384599 112 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC063979.1-201ENST00000415539 377 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL645608.4-201ENST00000423619 154 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC099799.1-201ENST00000439809 192 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC011816.1-201ENST00000441346 546 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 PCNPP5-201ENST00000452246 481 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AP000942.1-201ENST00000463969 747 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 RPL23AP2-201ENST00000471227 466 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL671862.1-201ENST00000515851 349 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 RN7SKP46-201ENST00000515942 234 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC069113.1-201ENST00000517763 267 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL121603.1-201ENST00000553815 142 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 SUB1P3-201ENST00000564581 315 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR3936-201ENST00000584304 110 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 RN7SL435P-201ENST00000584418 282 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 BDH2P1-201ENST00000602288 736 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC100812.1-201ENST00000607622 580 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR8069-1-201ENST00000616627 86 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR8069-2-201ENST00000621412 86 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC090971.4-201ENST00000560291 1800 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
HLA-DQA1Q5Y7H0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1Q5Y7H0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1Q5Y7H0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.34□□□□□ -1.72
HLA-DQA1Q5Y7H0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 ZNF72P-201ENST00000425869 1908 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.126-201ENST00000363382 111 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL445529.1-201ENST00000398713 389 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 RN7SKP106-201ENST00000410832 272 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 CYCSP33-201ENST00000414485 327 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 RPL36AP10-201ENST00000421785 322 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 MTATP6P4-201ENST00000427725 675 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 RPL21P2-201ENST00000440049 481 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL031274.1-201ENST00000450334 232 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 DEFB109F-201ENST00000491870 277 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC114801.2-201ENST00000503825 781 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-475P-201ENST00000516073 104 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 MIR4458-201ENST00000578872 75 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 MIR548AC-201ENST00000585049 88 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 OR1M4P-201ENST00000589199 287 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 SNORD39.4-201ENST00000620099 78 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 U3.53-201ENST00000628922 216 ntBASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms