Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC023043.4-201ENST00000612081 449 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC112484.5-201ENST00000624189 228 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.65□□□□□ -1.67
SSRP1Q08945 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSRP1Q08945 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.64□□□□□ -1.67
SSRP1Q08945 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.64□□□□□ -1.67
SSRP1Q08945 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.64□□□□□ -1.67
SSRP1Q08945 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.64□□□□□ -1.67
SSRP1Q08945 LINC02471-203ENST00000641941 4752 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSRP1Q08945 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SSRP1Q08945 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SSRP1Q08945 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSRP1Q08945 RNU4-73P-201ENST00000363164 141 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 Y_RNA.373-201ENST00000365600 103 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SSRP1Q08945 AL513331.1-201ENST00000411908 397 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC007390.1-201ENST00000415722 356 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC004552.1-201ENST00000419089 348 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AL353678.1-201ENST00000422735 741 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.64□□□□□ -1.67
SSRP1Q08945 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.64□□□□□ -1.67
SSRP1Q08945 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSRP1Q08945 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.64□□□□□ -1.67
SSRP1Q08945 AC104058.1-201ENST00000448028 297 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.64□□□□□ -1.67
SSRP1Q08945 AC004801.2-202ENST00000463559 283 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 RPS26P3-201ENST00000470205 348 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC090543.2-201ENST00000483963 348 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC004057.1-201ENST00000485827 348 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 FAM206BP-201ENST00000510179 541 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 RNU4-49P-201ENST00000516080 140 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 RNU6-1038P-201ENST00000516516 104 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 RN7SKP256-201ENST00000517201 314 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 TOMM20P2-201ENST00000540082 421 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.64□□□□□ -1.67
SSRP1Q08945 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.64□□□□□ -1.67
SSRP1Q08945 AC005668.1-201ENST00000571142 476 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 MIR4742-201ENST00000581069 85 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.64□□□□□ -1.67
SSRP1Q08945 AC021646.1-201ENST00000605469 484 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC092807.2-201ENST00000609367 243 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AL355810.1-201ENST00000614629 552 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 AC067931.1-201ENST00000624190 671 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.64□□□□□ -1.67
SSRP1Q08945 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.64□□□□□ -1.67
SSRP1Q08945 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SSRP1Q08945 RNU6-82P-201ENST00000363970 107 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 RNA5SP111-201ENST00000411386 101 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 AC092809.3-201ENST00000415453 231 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.63□□□□□ -1.67
SSRP1Q08945 MRPL50P4-201ENST00000446432 475 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AL049874.1-201ENST00000489560 388 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 MTCO3P9-201ENST00000506989 781 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.63□□□□□ -1.67
SSRP1Q08945 TTC39CP1-201ENST00000512513 755 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 MED28P6-201ENST00000558776 231 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AC136624.4-201ENST00000573044 370 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.63□□□□□ -1.67
SSRP1Q08945 AP001330.4-201ENST00000604350 154 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 AL591424.2-201ENST00000617023 128 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.63□□□□□ -1.67
SSRP1Q08945 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSRP1Q08945 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSRP1Q08945 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.63□□□□□ -1.67
SSRP1Q08945 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.63□□□□□ -1.67
SSRP1Q08945 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSRP1Q08945 RLIMP1-201ENST00000339626 1680 ntBASIC4.63□□□□□ -1.67
SSRP1Q08945 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSRP1Q08945 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSRP1Q08945 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.63□□□□□ -1.67
SSRP1Q08945 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSRP1Q08945 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSRP1Q08945 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSRP1Q08945 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.62□□□□□ -1.67
SSRP1Q08945 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSRP1Q08945 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSRP1Q08945 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSRP1Q08945 RNU6-288P-201ENST00000363690 104 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 RNA5SP399-201ENST00000364003 117 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 Y_RNA.378-201ENST00000365652 113 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 Y_RNA.509-201ENST00000384506 99 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 RNU6-1127P-201ENST00000384580 107 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 Y_RNA.530-201ENST00000384587 101 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 MIR514A1-201ENST00000385133 98 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 CISD1P1-201ENST00000393907 327 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 LAP3P1-201ENST00000403648 294 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 RNU4-6P-201ENST00000410804 122 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.62□□□□□ -1.67
SSRP1Q08945 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.62□□□□□ -1.67
SSRP1Q08945 AC011742.1-201ENST00000431448 434 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms