Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.6□□□□□ -1.83
RAE1P78406 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.6□□□□□ -1.83
RAE1P78406 AC174048.1-201ENST00000603389 144 ntBASIC3.6□□□□□ -1.83
RAE1P78406 AL365204.3-201ENST00000612448 685 ntBASIC3.6□□□□□ -1.83
RAE1P78406 AC012409.4-201ENST00000612923 249 ntBASIC3.6□□□□□ -1.83
RAE1P78406 FP236240.3-201ENST00000623061 327 ntBASIC3.6□□□□□ -1.83
RAE1P78406 AC112200.1-201ENST00000625015 234 ntBASIC3.6□□□□□ -1.83
RAE1P78406 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RAE1P78406 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAE1P78406 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RAE1P78406 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAE1P78406 MTND4P12-201ENST00000498999 1377 ntBASIC3.6□□□□□ -1.83
RAE1P78406 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.6□□□□□ -1.83
RAE1P78406 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.6□□□□□ -1.83
RAE1P78406 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RAE1P78406 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.6□□□□□ -1.83
RAE1P78406 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RAE1P78406 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAE1P78406 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 DEFB108F-201ENST00000344638 222 ntBASIC3.59□□□□□ -1.83
RAE1P78406 RNU4-20P-201ENST00000365601 151 ntBASIC3.59□□□□□ -1.83
RAE1P78406 RNU6-190P-201ENST00000384154 102 ntBASIC3.59□□□□□ -1.83
RAE1P78406 RNU6-817P-201ENST00000391083 104 ntBASIC3.59□□□□□ -1.83
RAE1P78406 Y_RNA.625-201ENST00000411256 107 ntBASIC3.59□□□□□ -1.83
RAE1P78406 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.59□□□□□ -1.83
RAE1P78406 HSFY6P-201ENST00000445573 403 ntBASIC3.59□□□□□ -1.83
RAE1P78406 CBWD4P-201ENST00000445695 655 ntBASIC3.59□□□□□ -1.83
RAE1P78406 RPL23AP31-201ENST00000456160 467 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.59□□□□□ -1.83
RAE1P78406 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.59□□□□□ -1.83
RAE1P78406 RNU7-180P-201ENST00000459240 63 ntBASIC3.59□□□□□ -1.83
RAE1P78406 HMGN2P26-201ENST00000463169 339 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.59□□□□□ -1.83
RAE1P78406 HMGN1P12-201ENST00000499125 195 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC091951.2-201ENST00000500762 203 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC117522.3-201ENST00000507974 584 ntBASIC3.59□□□□□ -1.83
RAE1P78406 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 AC010486.1-201ENST00000511793 424 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC023141.12-201ENST00000512399 199 ntBASIC3.59□□□□□ -1.83
RAE1P78406 MTCO1P35-201ENST00000515270 228 ntBASIC3.59□□□□□ -1.83
RAE1P78406 RN7SKP209-201ENST00000516888 304 ntBASIC3.59□□□□□ -1.83
RAE1P78406 RANP3-201ENST00000530970 276 ntBASIC3.59□□□□□ -1.83
RAE1P78406 ADI1P3-201ENST00000549509 470 ntBASIC3.59□□□□□ -1.83
RAE1P78406 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.59□□□□□ -1.83
RAE1P78406 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.59□□□□□ -1.83
RAE1P78406 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.59□□□□□ -1.83
RAE1P78406 RPL23AP84-201ENST00000571193 464 ntBASIC3.59□□□□□ -1.83
RAE1P78406 MIR4424-201ENST00000585257 86 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC091135.1-201ENST00000585943 307 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AL606490.9-201ENST00000603331 271 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC009994.1-201ENST00000606889 253 ntBASIC3.59□□□□□ -1.83
RAE1P78406 Y_RNA.804-201ENST00000615262 101 ntBASIC3.59□□□□□ -1.83
RAE1P78406 AC104260.1-201ENST00000616660 539 ntBASIC3.59□□□□□ -1.83
RAE1P78406 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.59□□□□□ -1.83
RAE1P78406 AC099654.5-201ENST00000636479 350 ntBASIC3.59□□□□□ -1.83
RAE1P78406 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RAE1P78406 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.59□□□□□ -1.83
RAE1P78406 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
RAE1P78406 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RAE1P78406 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
RAE1P78406 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.58□□□□□ -1.84
RAE1P78406 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 MIR607-201ENST00000385241 96 ntBASIC3.58□□□□□ -1.84
RAE1P78406 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.58□□□□□ -1.84
RAE1P78406 UBE2V1P2-201ENST00000397758 440 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AL606923.1-201ENST00000406616 190 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AL451054.2-201ENST00000420896 202 ntBASIC3.58□□□□□ -1.84
RAE1P78406 RPL7L1P10-201ENST00000427790 463 ntBASIC3.58□□□□□ -1.84
RAE1P78406 NDUFB1P1-201ENST00000435191 180 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.58□□□□□ -1.84
RAE1P78406 MTND3P16-201ENST00000452205 344 ntBASIC3.58□□□□□ -1.84
RAE1P78406 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.58□□□□□ -1.84
RAE1P78406 AC133473.1-201ENST00000455173 299 ntBASIC3.58□□□□□ -1.84
RAE1P78406 SNRPFP3-201ENST00000457792 225 ntBASIC3.58□□□□□ -1.84
RAE1P78406 RN7SL323P-201ENST00000494712 295 ntBASIC3.58□□□□□ -1.84
RAE1P78406 CEACAMP10-202ENST00000495431 496 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC091885.1-201ENST00000506658 268 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC104806.1-201ENST00000508720 308 ntBASIC3.58□□□□□ -1.84
RAE1P78406 RNU6-507P-201ENST00000516045 100 ntBASIC3.58□□□□□ -1.84
RAE1P78406 RNU6-875P-201ENST00000516488 106 ntBASIC3.58□□□□□ -1.84
RAE1P78406 RN7SKP83-201ENST00000516512 178 ntBASIC3.58□□□□□ -1.84
RAE1P78406 RNU6-1073P-201ENST00000517182 106 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.58□□□□□ -1.84
RAE1P78406 BNIP3P6-201ENST00000549284 499 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC007424.1-203ENST00000554613 687 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.58□□□□□ -1.84
RAE1P78406 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
RAE1P78406 MED28P6-201ENST00000558776 231 ntBASIC3.58□□□□□ -1.84
RAE1P78406 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.58□□□□□ -1.84
RAE1P78406 AC006270.2-201ENST00000578523 652 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC008521.1-201ENST00000587471 187 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms