Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR558-201ENST00000384920 94 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 MIR141-201ENST00000384975 95 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NKX2-1P43699 RNU6-1077P-201ENST00000410506 102 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.95□□□□□ -1.94
NKX2-1P43699 Z85995.1-201ENST00000415547 335 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AL356095.1-201ENST00000417217 199 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 OR2AS1P-201ENST00000427827 319 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 MED13P1-201ENST00000428342 171 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX2-1P43699 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.95□□□□□ -1.94
NKX2-1P43699 RPL31P35-201ENST00000431058 377 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-1P43699 HMGB3P12-201ENST00000438745 556 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 H2AFZP6-201ENST00000444403 394 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC114755.5-201ENST00000447760 831 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX2-1P43699 RPS4XP2-201ENST00000458402 793 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC012181.1-201ENST00000479895 423 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 AC011352.1-201ENST00000512300 793 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 RNU6-579P-201ENST00000516879 102 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX2-1P43699 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 FAM92A1P1-201ENST00000528023 890 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-1P43699 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 MTATP6P3-201ENST00000581686 676 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC008962.1-201ENST00000605729 304 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AP001330.5-201ENST00000607176 411 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AL161734.1-201ENST00000609720 557 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AC090517.2-201ENST00000614966 680 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 AC006111.3-201ENST00000622137 383 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 AP000553.6-201ENST00000641242 118 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 AL049641.1-201ENST00000441055 1948 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NKX2-1P43699 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NKX2-1P43699 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NKX2-1P43699 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.94□□□□□ -1.94
NKX2-1P43699 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AL513302.2-201ENST00000562313 1842 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 RNU6-1120P-201ENST00000362988 108 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 Y_RNA.159-201ENST00000363674 87 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 RNU6-74P-201ENST00000384235 107 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NKX2-1P43699 MTCO3P40-201ENST00000392516 676 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RPS4XP8-201ENST00000402039 771 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 U3.39-201ENST00000408569 239 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RNU2-33P-201ENST00000410344 192 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RNU6-195P-201ENST00000411352 109 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 RPS15AP12-201ENST00000419498 388 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC092047.1-201ENST00000424997 240 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC073464.1-201ENST00000429823 534 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 GPR143P-201ENST00000434155 205 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 Z82210.1-201ENST00000440037 231 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RPL23AP20-201ENST00000447965 421 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 TPT1P12-201ENST00000448968 492 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.94□□□□□ -1.94
NKX2-1P43699 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 RN7SL442P-201ENST00000473804 320 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RPL30P14-201ENST00000482744 348 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 RN7SL432P-201ENST00000484057 298 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC007182.2-201ENST00000489251 402 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-1P43699 SNORA31.1-201ENST00000515993 133 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 SNORA31.3-201ENST00000516029 96 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 SNORA31.5-201ENST00000516190 133 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 SNORD27.1-201ENST00000516319 72 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AP006245.1-201ENST00000522549 120 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 CASP1P1-201ENST00000526345 212 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC002545.1-201ENST00000592511 181 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 BNIP3P33-201ENST00000598912 569 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC025165.5-201ENST00000602802 578 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-1P43699 AL391646.1-201ENST00000603860 190 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AP000860.1-201ENST00000605250 559 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AP002360.4-201ENST00000606980 481 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.94□□□□□ -1.94
NKX2-1P43699 MIR378J-201ENST00000611988 109 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NKX2-1P43699 AC244100.1-202ENST00000621554 382 ntBASIC2.94□□□□□ -1.94
NKX2-1P43699 MTND1P37-201ENST00000636562 264 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms