Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RPL23AP22-201ENST00000437556 453 ntBASIC6□□□□□ -1.45
CLCN1P35523 PIGFP3-201ENST00000441918 722 ntBASIC6□□□□□ -1.45
CLCN1P35523 RPL7AP28-201ENST00000464513 571 ntBASIC6□□□□□ -1.45
CLCN1P35523 SCARNA24.2-201ENST00000516968 130 ntBASIC6□□□□□ -1.45
CLCN1P35523 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6□□□□□ -1.45
CLCN1P35523 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6□□□□□ -1.45
CLCN1P35523 EDDM3DP-201ENST00000554692 434 ntBASIC6□□□□□ -1.45
CLCN1P35523 Y_RNA.772-201ENST00000606692 102 ntBASIC6□□□□□ -1.45
CLCN1P35523 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6□□□□□ -1.45
CLCN1P35523 SRRM1P3-201ENST00000426911 2678 ntBASIC6□□□□□ -1.45
CLCN1P35523 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CLCN1P35523 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.99□□□□□ -1.45
CLCN1P35523 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
CLCN1P35523 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLCN1P35523 AL031595.2-201ENST00000624215 19071 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 Y_RNA.83-201ENST00000363005 113 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 RNU6-173P-201ENST00000364215 104 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 AL022722.2-201ENST00000402519 180 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 RPS3AP2-201ENST00000407190 754 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN1P35523 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.99□□□□□ -1.45
CLCN1P35523 TMEM167AP1-201ENST00000423409 219 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 MTCO1P39-201ENST00000426148 480 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.99□□□□□ -1.45
CLCN1P35523 TDGF1P1-201ENST00000445734 527 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 AL450023.1-201ENST00000450868 751 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 Y_RNA.644-201ENST00000459006 113 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 Y_RNA.674-201ENST00000516362 113 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 Y_RNA.706-201ENST00000516933 99 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 AC109479.2-201ENST00000517842 174 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 IGKV3D-34-201ENST00000522638 302 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.99□□□□□ -1.45
CLCN1P35523 SRGNP1-201ENST00000603392 451 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.99□□□□□ -1.45
CLCN1P35523 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CLCN1P35523 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLCN1P35523 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN1P35523 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 AL450326.2-201ENST00000421913 1962 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLCN1P35523 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CLCN1P35523 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 RN7SKP104-201ENST00000362605 328 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 RNU6-545P-201ENST00000362681 104 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 RNU6-187P-201ENST00000384139 106 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 Y_RNA.464-201ENST00000384282 110 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 MIR10A-201ENST00000385043 110 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 PCNPP3-201ENST00000393579 471 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AL009179.1-201ENST00000406085 265 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 Y_RNA.623-201ENST00000411128 95 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 HMGN1P20-201ENST00000411849 300 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AC007161.1-204ENST00000423039 460 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.98□□□□□ -1.45
CLCN1P35523 RPS29P14-201ENST00000431518 171 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AL445305.1-201ENST00000432577 575 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 HIGD1AP2-201ENST00000446367 280 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 NDUFB4P10-201ENST00000452541 359 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AL136097.1-201ENST00000456945 913 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AC034236.1-201ENST00000469891 373 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.98□□□□□ -1.45
CLCN1P35523 RNU6-615P-201ENST00000516065 106 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 CASP1P1-201ENST00000526345 212 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.98□□□□□ -1.45
CLCN1P35523 AC104581.2-201ENST00000572227 430 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 MIR4458-201ENST00000578872 75 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 MIR3133-201ENST00000583157 78 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.98□□□□□ -1.45
CLCN1P35523 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.98□□□□□ -1.45
CLCN1P35523 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.98□□□□□ -1.45
CLCN1P35523 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.98□□□□□ -1.45
CLCN1P35523 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
CLCN1P35523 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLCN1P35523 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLCN1P35523 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLCN1P35523 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.97□□□□□ -1.45
CLCN1P35523 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLCN1P35523 AC090971.4-201ENST00000560291 1800 ntBASIC5.97□□□□□ -1.45
CLCN1P35523 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.97□□□□□ -1.45
CLCN1P35523 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLCN1P35523 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLCN1P35523 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLCN1P35523 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLCN1P35523 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLCN1P35523 RNU6-378P-201ENST00000384324 107 ntBASIC5.97□□□□□ -1.45
CLCN1P35523 RNY3P4-201ENST00000384428 101 ntBASIC5.97□□□□□ -1.45
CLCN1P35523 Y_RNA.541-201ENST00000384640 113 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms