Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 EI24P1-201ENST00000416584 867 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 AC010154.1-201ENST00000425857 269 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 AL162725.1-201ENST00000435405 301 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 AP001324.2-201ENST00000461163 319 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 HMGB1P25-201ENST00000468402 607 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 AC109327.1-201ENST00000471666 403 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 SNRPCP3-201ENST00000474888 476 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 MTND3P25-201ENST00000509243 135 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 RNU6-1219P-201ENST00000516143 112 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 RNU6-27P-201ENST00000516146 107 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 RNU6-347P-201ENST00000516658 105 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 RNU6-919P-201ENST00000516731 104 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 RNU6-352P-201ENST00000516908 107 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 AC023575.1-201ENST00000580510 358 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 MIR4282-201ENST00000583613 67 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 AC006329.2-201ENST00000611491 394 ntBASIC5.73□□□□□ -1.49
ALDH1A1P00352 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.73□□□□□ -1.49
ALDH1A1P00352 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ALDH1A1P00352 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 OR56B2P-202ENST00000641377 2453 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 RNU4-90P-201ENST00000362773 141 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 RNU6-1130P-201ENST00000365434 107 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 SNORA2.3-201ENST00000383920 135 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 SNORD51-201ENST00000384320 80 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 Y_RNA.504-201ENST00000384481 104 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 RNU6-658P-201ENST00000384606 106 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 CR769767.1-201ENST00000436337 346 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 RPS29P9-201ENST00000440360 171 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 snoU13.7-201ENST00000459220 104 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 NIP7P2-201ENST00000485801 544 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC016065.2-201ENST00000514530 444 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC018442.3-201ENST00000523025 183 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 FKBP1BP1-201ENST00000553366 325 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 LRRC37A5P-203ENST00000580181 585 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 MIR5692A1-201ENST00000580523 69 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC025588.3-201ENST00000604182 274 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 SNORD39.4-201ENST00000620099 78 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 AC026523.2-201ENST00000625039 7739 ntBASIC5.72□□□□□ -1.49
ALDH1A1P00352 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ALDH1A1P00352 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ALDH1A1P00352 AP002512.4-202ENST00000641599 4530 ntBASIC5.71□□□□□ -1.49
ALDH1A1P00352 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
ALDH1A1P00352 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ALDH1A1P00352 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ALDH1A1P00352 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ALDH1A1P00352 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ALDH1A1P00352 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ALDH1A1P00352 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ALDH1A1P00352 RNA5SP391-201ENST00000363456 119 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 RNA5SP397-201ENST00000391323 118 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 RPS27AP12-201ENST00000429552 465 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 AL591043.1-201ENST00000432461 424 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 AL360271.2-201ENST00000447710 161 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 RPL23AP56-201ENST00000460778 453 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 SCARNA22-201ENST00000503991 125 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 AC025755.1-201ENST00000521306 278 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 VN1R85P-201ENST00000601587 426 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 MIR92B-201ENST00000607575 96 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms