Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 ZNF971P-201ENST00000562068 1249 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP4O75161 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.5□□□□□ -2.01
NPHP4O75161 AC006249.1-201ENST00000621223 471 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 NUP58P1-201ENST00000502546 1738 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AC002546.1-201ENST00000588041 2504 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP4O75161 RNU6-251P-201ENST00000363235 104 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 RPL22P22-201ENST00000395439 379 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AL133264.1-201ENST00000407157 562 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 SSXP9-201ENST00000417503 292 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP4O75161 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.49□□□□□ -2.01
NPHP4O75161 MTND4LP10-201ENST00000435146 291 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 MTND2P19-201ENST00000449129 1012 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 AC008379.1-201ENST00000463655 464 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AC091860.1-201ENST00000505723 432 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AC027338.1-201ENST00000514840 825 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP4O75161 ERHP1-201ENST00000523006 310 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 CBX3P4-201ENST00000538909 354 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP4O75161 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP4O75161 LARP7P2-201ENST00000575306 125 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 MIR4452-201ENST00000583004 71 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 AP002906.1-201ENST00000603405 233 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AL021368.1-201ENST00000607490 540 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AL512506.1-201ENST00000613918 449 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP4O75161 AC008083.4-201ENST00000615076 444 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 AL353748.2-201ENST00000622148 471 ntBASIC2.49□□□□□ -2.01
NPHP4O75161 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NPHP4O75161 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NPHP4O75161 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP4O75161 AL136520.1-201ENST00000600311 1322 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 CD24P4-201ENST00000382840 243 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 RNU1-109P-201ENST00000383960 147 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 MCTS2P-201ENST00000394552 546 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AL513331.1-201ENST00000411908 397 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AL133384.1-201ENST00000412744 351 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 MTATP6P4-201ENST00000427725 675 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 RPL17P35-201ENST00000432217 549 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 SSXP1-201ENST00000453640 473 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.48□□□□□ -2.01
NPHP4O75161 RNU1-123P-201ENST00000458950 160 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AC006390.1-201ENST00000508068 283 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 RNA5SP102-201ENST00000516865 106 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 RNA5SP135-201ENST00000517019 125 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.48□□□□□ -2.01
NPHP4O75161 HSPE1P20-201ENST00000538133 289 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AC090502.2-201ENST00000549267 280 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 AC055876.5-201ENST00000605667 259 ntBASIC2.48□□□□□ -2.01
NPHP4O75161 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP4O75161 MTCO1P4-201ENST00000520516 1409 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP4O75161 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP4O75161 MIRLET7G-201ENST00000362280 84 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 RNU6-354P-201ENST00000383862 107 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 RNU6-610P-201ENST00000384264 107 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 RNU6-1077P-201ENST00000410506 102 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.47□□□□□ -2.01
NPHP4O75161 AC233728.2-201ENST00000425348 757 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP4O75161 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.47□□□□□ -2.01
NPHP4O75161 EEF1B2P4-201ENST00000551398 348 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 MED28P6-201ENST00000558776 231 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 AC093519.1-201ENST00000566109 298 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 AC009220.3-201ENST00000604318 586 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 AP000238.1-201ENST00000608759 426 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 AP005229.2-201ENST00000609980 697 ntBASIC2.47□□□□□ -2.01
NPHP4O75161 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
NPHP4O75161 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
NPHP4O75161 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPHP4O75161 MIR493-201ENST00000385254 89 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NPHP4O75161 RNA5SP38-201ENST00000410750 119 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 POLHP1-201ENST00000411806 470 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 HMGB3P2-201ENST00000411913 584 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP4O75161 AL358075.3-201ENST00000426289 226 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 UBE2D3P3-201ENST00000426992 425 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 RAC1P8-201ENST00000427086 527 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 MTCYBP32-201ENST00000427945 1084 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 SNRPEP4-201ENST00000435815 279 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP4O75161 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPHP4O75161 AC009474.2-201ENST00000451383 136 ntBASIC2.46□□□□□ -2.02
NPHP4O75161 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.46□□□□□ -2.02
NPHP4O75161 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.46□□□□□ -2.02
NPHP4O75161 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP4O75161 AC109464.2-201ENST00000510242 943 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms