Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ACTN4O43707 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ACTN4O43707 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.9□□□□□ -1.46
ACTN4O43707 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
ACTN4O43707 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ACTN4O43707 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.9□□□□□ -1.46
ACTN4O43707 TOMM22P6-201ENST00000465035 409 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.9□□□□□ -1.46
ACTN4O43707 ENPP7P11-201ENST00000505915 627 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.9□□□□□ -1.46
ACTN4O43707 HMGB1P40-201ENST00000525121 540 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.9□□□□□ -1.46
ACTN4O43707 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.9□□□□□ -1.46
ACTN4O43707 MIR3614-201ENST00000581261 86 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 AC008521.2-201ENST00000591021 259 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 MIR6861-201ENST00000618657 64 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 MIR8080-201ENST00000622224 89 ntBASIC5.9□□□□□ -1.46
ACTN4O43707 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.9□□□□□ -1.47
ACTN4O43707 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
ACTN4O43707 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ACTN4O43707 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ACTN4O43707 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ACTN4O43707 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
ACTN4O43707 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ACTN4O43707 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.9□□□□□ -1.47
ACTN4O43707 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ACTN4O43707 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ACTN4O43707 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ACTN4O43707 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 Y_RNA.215-201ENST00000364204 112 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 RN7SKP269-201ENST00000365545 319 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 Y_RNA.597-201ENST00000410463 100 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 RNU5A-5P-201ENST00000411054 116 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 AL592045.1-201ENST00000429867 352 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 AC016712.1-201ENST00000431088 378 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 CFL1P1-202ENST00000432948 411 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 HIGD1AP2-201ENST00000446367 280 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 BX276092.4-201ENST00000452056 248 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 AC114982.1-201ENST00000469402 321 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.89□□□□□ -1.47
ACTN4O43707 AC091959.1-201ENST00000495857 238 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 AK3P2-201ENST00000507976 429 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.89□□□□□ -1.47
ACTN4O43707 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.89□□□□□ -1.47
ACTN4O43707 RNU7-110P-201ENST00000516891 62 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 Y_RNA.719-201ENST00000517156 106 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 AC126177.5-201ENST00000549599 178 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 AL359881.1-201ENST00000602916 267 ntBASIC5.89□□□□□ -1.47
ACTN4O43707 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.89□□□□□ -1.47
ACTN4O43707 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.89□□□□□ -1.47
ACTN4O43707 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
ACTN4O43707 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ACTN4O43707 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ACTN4O43707 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 UBE2WP1-201ENST00000362030 340 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 RNU1-77P-201ENST00000390868 162 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ACTN4O43707 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.88□□□□□ -1.47
ACTN4O43707 HMGN2P27-201ENST00000427352 270 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 RPS20P1-201ENST00000434853 354 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.88□□□□□ -1.47
ACTN4O43707 RPL7AP61-201ENST00000443410 636 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 RPS27P26-201ENST00000494583 239 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 RN7SL466P-201ENST00000497546 295 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.88□□□□□ -1.47
ACTN4O43707 RNU6-941P-201ENST00000516346 108 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 RNU6-143P-201ENST00000516942 93 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 RNU6-1315P-201ENST00000517187 99 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 AP005660.1-201ENST00000522972 293 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.88□□□□□ -1.47
ACTN4O43707 AC022404.1-201ENST00000555320 273 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 MIR1273C-201ENST00000578669 77 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.88□□□□□ -1.47
ACTN4O43707 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.88□□□□□ -1.47
ACTN4O43707 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.88□□□□□ -1.47
ACTN4O43707 AL049539.1-201ENST00000611964 459 ntBASIC5.88□□□□□ -1.47
ACTN4O43707 AL691477.1-201ENST00000624398 162 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms