Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 RNU1-70P-201ENST00000362618 164 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 RNU6-97P-201ENST00000363387 104 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 RNY4P34-201ENST00000364779 95 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 U3.19-201ENST00000390893 196 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 RPS3AP36-201ENST00000398190 775 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 FCF1P10-201ENST00000407590 479 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 RNU4-65P-201ENST00000410473 140 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC092447.6-201ENST00000414578 210 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 USP9YP36-201ENST00000424581 829 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC079448.1-201ENST00000449377 373 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 snoU13.4-201ENST00000458916 104 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC004924.1-201ENST00000480160 781 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC108078.1-201ENST00000508073 725 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC011352.1-201ENST00000512300 793 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 RNU6-506P-201ENST00000516553 94 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 OR4P1P-201ENST00000530808 1136 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC126118.1-201ENST00000607744 628 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 BX664608.1-201ENST00000610519 487 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AL390240.1-201ENST00000612950 384 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC002550.2-201ENST00000621246 394 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC138649.3-201ENST00000622154 254 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 AC091953.2-201ENST00000623979 160 ntBASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX9Q9Y5X1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 GNG5P1-201ENST00000255500 204 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 RPL7P26-201ENST00000333817 754 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 MIR30E-201ENST00000362104 92 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 U3.20-201ENST00000390909 217 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 RNU2-47P-201ENST00000410649 186 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 ISCA1P6-201ENST00000427740 390 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC112653.1-201ENST00000443851 386 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 SSXP4-201ENST00000451349 245 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 RPS27P29-201ENST00000463110 252 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC012181.1-201ENST00000479895 423 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC022483.1-201ENST00000514020 567 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 TRAV37-201ENST00000553906 342 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL356432.3-201ENST00000568952 465 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 MIR3682-201ENST00000581338 84 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 DUXAP4-201ENST00000603046 613 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL590099.1-201ENST00000615276 138 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 MIR7112-201ENST00000616126 65 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC072046.2-201ENST00000618366 268 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC068880.5-201ENST00000624331 290 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL160394.1-201ENST00000624765 724 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC110994.2-201ENST00000635481 492 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC007496.3-201ENST00000624987 3443 ntBASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX9Q9Y5X1 AC011460.1-201ENST00000636268 1834 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 OR4G2P-201ENST00000328113 903 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 Y_RNA.554-201ENST00000384672 102 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AL357075.1-201ENST00000404107 726 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 MIR548F1-201ENST00000408667 84 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 MTND1P21-201ENST00000412991 285 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 MTND3P17-201ENST00000416968 344 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 NEK4P1-201ENST00000433383 879 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 MTND3P21-201ENST00000433774 331 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC104850.1-201ENST00000435940 476 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms