Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-105P-201ENST00000363909 104 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 SNORA25.7-201ENST00000364375 127 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-763P-201ENST00000390865 106 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AIMP1P2-201ENST00000425294 312 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AL662874.1-201ENST00000426065 230 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 U8.19-201ENST00000459095 133 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 RN7SL326P-201ENST00000477493 296 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC020593.1-201ENST00000507399 299 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-155P-201ENST00000516347 100 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC007494.1-201ENST00000562293 760 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 AC108081.1-201ENST00000604358 221 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 MIR6844-201ENST00000637122 62 ntBASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA4Q9Y5G9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AC116096.1-201ENST00000566804 2314 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AC104260.2-201ENST00000623551 3497 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-407P-201ENST00000365280 104 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 GNG5P2-201ENST00000372054 207 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 SNORA29-201ENST00000384183 140 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 FABP5P15-201ENST00000453566 214 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AC136777.2-201ENST00000522979 358 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AL590392.1-201ENST00000604960 446 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 MIR4496-201ENST00000635896 61 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AC241585.2-209ENST00000638217 143 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 AC114774.1-201ENST00000507410 1770 ntBASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA4Q9Y5G9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
PCDHGA4Q9Y5G9 MAPK10-328ENST00000641553 4009 ntBASIC6.02□□□□□ -1.44
PCDHGA4Q9Y5G9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 AC008555.8-201ENST00000623602 2168 ntBASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 CRP-203ENST00000368111 512 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 SNORA40C-201ENST00000391285 128 ntBASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 AL391361.1-201ENST00000405580 489 ntBASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 RNA5SP296-201ENST00000410523 111 ntBASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 AC079355.1-201ENST00000421770 223 ntBASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 RPS27AP12-201ENST00000429552 465 ntBASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA4Q9Y5G9 VPS25P1-201ENST00000455691 508 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms