Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC024940.4-201ENST00000605507 246 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AC007785.2-201ENST00000598627 1916 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AP001029.2-203ENST00000589795 4910 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SKP103-201ENST00000363848 320 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 RNA5SP240-201ENST00000365355 128 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 SNORA5.1-201ENST00000384275 131 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 MIR765-201ENST00000390226 114 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.602-201ENST00000410535 92 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SKP216-201ENST00000411050 312 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.623-201ENST00000411128 95 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 TOMM20P4-201ENST00000427861 435 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AL358472.1-201ENST00000431295 329 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC098831.1-201ENST00000440661 216 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC073465.2-201ENST00000440938 498 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC034236.1-201ENST00000469891 373 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AL049874.1-201ENST00000489560 388 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 ANXA2P1-201ENST00000505539 926 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 RNU7-175P-201ENST00000515915 61 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.683-201ENST00000516508 93 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC025755.1-201ENST00000521306 278 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AP005403.1-201ENST00000579720 229 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 SNORD84-203ENST00000584275 78 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC073657.2-201ENST00000605661 303 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC005046.1-201ENST00000608515 625 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC126915.2-201ENST00000610957 190 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 Mico1.1-201ENST00000611698 204 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 AC240442.1-201ENST00000616055 283 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 GVINP1-202ENST00000531871 7271 ntBASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB11Q9Y5F2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC116096.1-201ENST00000566804 2314 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RPL23P2-201ENST00000320371 421 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RNA5SP183-201ENST00000362452 119 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-227P-201ENST00000362865 103 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 SNORD113-8-201ENST00000363497 74 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 MIR514A1-201ENST00000385133 98 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-493P-201ENST00000391321 108 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC093655.2-201ENST00000425735 631 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AL627311.1-201ENST00000431514 115 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 FABP5P15-201ENST00000453566 214 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC104164.2-201ENST00000496953 495 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-496P-201ENST00000516145 99 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-1012P-201ENST00000516606 109 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC087441.2-201ENST00000529141 262 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC024405.2-202ENST00000532731 184 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC120057.2-201ENST00000571520 271 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 MIR4646-201ENST00000580775 63 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 MIR7853-201ENST00000584820 132 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AL139395.1-201ENST00000603662 160 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 MIR6748-201ENST00000610433 71 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 AC010632.3-201ENST00000611377 369 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 uc_338.7-201ENST00000621834 124 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms