Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLCF1Q9UBD9 OR4G2P-202ENST00000641004 1759 ntBASIC2.41□□□□□ -2.02
CLCF1Q9UBD9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.41□□□□□ -2.02
CLCF1Q9UBD9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLCF1Q9UBD9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CLCF1Q9UBD9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLCF1Q9UBD9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 RPL9P7-201ENST00000330965 580 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 RNU6-223P-201ENST00000362830 107 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 SNORA23-201ENST00000365128 182 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL590084.2-201ENST00000401481 382 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL356057.3-201ENST00000402607 340 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 MIR1305-201ENST00000408300 86 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 Z80107.1-201ENST00000436830 412 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL117351.1-201ENST00000438864 766 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL031183.1-201ENST00000457667 207 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC104472.2-201ENST00000469035 601 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 SNORA9.3-201ENST00000516383 129 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC068587.4-201ENST00000533893 186 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 OR7K1P-201ENST00000546439 926 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 HMGB1P14-201ENST00000557424 591 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 ACTR3BP3-201ENST00000565577 979 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL354943.1-201ENST00000572103 781 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC060771.1-201ENST00000582031 164 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC069234.5-201ENST00000611056 416 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AL139418.1-201ENST00000613613 177 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 AC099063.3-201ENST00000642066 185 ntBASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLCF1Q9UBD9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 SNORD113-6-201ENST00000363345 75 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RNA5SP88-201ENST00000365560 109 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RNU6-432P-201ENST00000384196 109 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RNA5SP252-201ENST00000391131 119 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 SNORA11.2-201ENST00000408318 127 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RSU1P2-202ENST00000437884 485 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RPL39P40-201ENST00000445481 146 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RNU6-420P-201ENST00000458780 107 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RPS20P20-201ENST00000460498 340 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 SETP11-201ENST00000473027 690 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC135721.1-201ENST00000497954 479 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RNU6-1256P-201ENST00000516539 103 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 RNU6-1282P-201ENST00000516735 96 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AP001372.4-201ENST00000524889 472 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AP000867.2-201ENST00000532468 320 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL133271.1-201ENST00000538229 291 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL355836.1-201ENST00000555951 870 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 GLUD1P4-201ENST00000590914 418 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 NRBF2P5-201ENST00000603087 788 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC013553.2-201ENST00000604244 589 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC097468.3-201ENST00000607956 456 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC024560.3-201ENST00000608482 349 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC005046.1-201ENST00000608515 625 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL359198.2-201ENST00000611836 194 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 AL138713.1-201ENST00000624026 2130 ntBASIC2.39□□□□□ -2.03
CLCF1Q9UBD9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms