Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 MIR3616-201ENST00000584070 92 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AL390838.2-201ENST00000602394 274 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AC135507.1-201ENST00000607214 561 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AL021368.1-201ENST00000607490 540 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 MIR7106-201ENST00000612419 65 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AC009159.1-201ENST00000618386 642 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 RNU1-39P-201ENST00000383897 165 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 RNU4-72P-201ENST00000410754 173 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC023141.4-201ENST00000412031 328 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AL161449.1-201ENST00000414531 1199 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 RPL26P9-201ENST00000457466 433 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 RN7SL432P-201ENST00000484057 298 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 GTF2IP9-201ENST00000502460 301 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC008427.1-201ENST00000503102 655 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC093801.2-201ENST00000503966 1050 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 HMGB1P28-201ENST00000507778 552 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 RNU4-29P-201ENST00000515943 174 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC109329.2-201ENST00000519658 482 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 EIF4BP1-201ENST00000554881 351 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 MIR4275-201ENST00000636486 87 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 DDX10P1-201ENST00000448545 1933 ntBASIC2.12□□□□□ -2.07
VAPAQ9P0L0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.12□□□□□ -2.07
VAPAQ9P0L0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC080128.1-201ENST00000474389 1917 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 RNU6-884P-201ENST00000363889 107 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 RNU6-7-201ENST00000364784 107 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 RNU6-8-201ENST00000365467 107 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 BX119904.4-201ENST00000424402 301 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 MTCYBP42-201ENST00000444653 1130 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AL139109.1-201ENST00000455491 297 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC096576.1-201ENST00000489014 359 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 NDUFS5P6-201ENST00000529136 295 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 SLC2A13P1-201ENST00000531560 322 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 HIGD1AP17-201ENST00000554576 276 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 MIR3200-201ENST00000580767 85 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 FTX_3.1-201ENST00000610451 147 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC013476.2-201ENST00000614456 459 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 MTND1P37-201ENST00000636562 264 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VAPAQ9P0L0 AC080100.1-201ENST00000624239 5356 ntBASIC2.11□□□□□ -2.07
VAPAQ9P0L0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RNA5SP387-201ENST00000364226 106 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RNU6-1078P-201ENST00000364522 103 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 SNORA70.4-201ENST00000365509 134 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RNU2-33P-201ENST00000410344 192 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 TPMTP2-201ENST00000414372 726 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 SEPT2P1-201ENST00000419651 180 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 USP12PX-201ENST00000432383 1057 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 MTND2P20-201ENST00000440805 661 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 IFNA11P-201ENST00000446352 526 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AL031659.1-201ENST00000447075 539 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RN7SL636P-201ENST00000497504 294 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RNA5SP24-201ENST00000516478 95 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 RNU6-714P-201ENST00000516963 103 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AP003355.1-201ENST00000518956 587 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms