Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC121334.2-201ENST00000605387 271 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 RNU6-87P-201ENST00000607561 108 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RNU6-1155P-201ENST00000363554 107 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RNU4-75P-201ENST00000364621 146 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RNU6-114P-201ENST00000384704 105 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RNU2-8P-201ENST00000410727 190 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RPL30P2-201ENST00000414021 291 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 SPA17P1-201ENST00000416656 452 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC073614.1-201ENST00000438690 650 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AL049734.2-201ENST00000441066 616 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 MTND6P13-201ENST00000443510 523 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC244505.5-201ENST00000443639 207 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 RPL37P4-201ENST00000448908 268 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC234775.1-201ENST00000454247 670 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC011602.1-201ENST00000546484 331 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AL157394.1-201ENST00000562983 1224 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC137800.2-201ENST00000574375 120 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 NRBF2P1-201ENST00000587407 859 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AC006566.1-201ENST00000608943 513 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 AL589743.7-201ENST00000612637 233 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 FARSBP1-201ENST00000435808 1778 ntBASIC3.63□□□□□ -1.83
DDX4Q9NQI0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX4Q9NQI0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 Y_RNA.500-201ENST00000384466 111 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 Y_RNA.505-201ENST00000384489 102 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 RNU6-297P-201ENST00000384636 107 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC110754.1-201ENST00000399740 601 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL031121.1-201ENST00000406553 254 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC078974.1-201ENST00000411597 223 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 RABEPKP1-201ENST00000440529 1026 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL022238.1-201ENST00000442557 355 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL135938.1-201ENST00000443141 297 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 RPL17P49-201ENST00000443728 411 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 KLF3P2-201ENST00000465138 268 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 RNU1-143P-201ENST00000516296 146 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 MIR4528-201ENST00000577763 90 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 MIR4425-201ENST00000580572 84 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 MIR4672-201ENST00000583126 81 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC006504.3-201ENST00000586818 523 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC012669.1-201ENST00000603209 283 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC091805.2-201ENST00000603848 235 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC090578.1-201ENST00000604955 591 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 U1.23-201ENST00000610293 146 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 BX664608.1-201ENST00000610519 487 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC087241.4-201ENST00000612441 480 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 RNU1-68P-201ENST00000615382 146 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 MIR6130-201ENST00000619419 109 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 U1.39-201ENST00000621562 146 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC084035.1-201ENST00000634543 607 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 AC004925.1-201ENST00000624256 2706 ntBASIC3.62□□□□□ -1.83
DDX4Q9NQI0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX4Q9NQI0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AL365361.1-201ENST00000566942 3481 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RPL7P26-201ENST00000333817 754 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RNU6-629P-201ENST00000384061 103 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms