Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC098848.2-201ENST00000588023 330 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC091167.4-201ENST00000605079 184 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 SNORA62.6-201ENST00000606322 83 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC004832.5-201ENST00000608677 401 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC004777.1-201ENST00000624317 287 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC093908.1-201ENST00000623125 8092 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 RNU6-1097P-201ENST00000363586 107 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 RNU6-188P-201ENST00000364207 107 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 Y_RNA.296-201ENST00000364930 108 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 RPL21P3-201ENST00000395517 478 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AL445189.1-201ENST00000405722 338 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 U3.39-201ENST00000408569 239 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC245028.1-201ENST00000423259 256 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 ZNF863P-201ENST00000426746 417 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 VN1R108P-201ENST00000431580 830 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AL358934.1-201ENST00000432346 324 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 RPL36AP6-201ENST00000435770 321 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 HMGB3P11-201ENST00000440127 604 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 TPT1P7-201ENST00000458300 517 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC146507.2-201ENST00000460608 476 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 HMGN2P13-201ENST00000476476 274 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC004924.1-201ENST00000480160 781 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC007182.2-201ENST00000489251 402 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AL358832.1-201ENST00000497800 389 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 SNORA31.1-201ENST00000515993 133 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 SNORA31.3-201ENST00000516029 96 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 SNORA31.5-201ENST00000516190 133 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 SNORA70.19-201ENST00000516717 90 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AL606490.9-201ENST00000603331 271 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC174048.1-201ENST00000603389 144 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC007363.1-201ENST00000604736 620 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AL136363.1-201ENST00000605349 337 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC007619.2-201ENST00000605743 379 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC099842.1-201ENST00000619919 596 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 MIR8059-201ENST00000620427 81 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC068880.5-201ENST00000624331 290 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 AC092447.7-201ENST00000422212 1621 ntBASIC3.37□□□□□ -1.87
NR1H4Q96RI1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H4Q96RI1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 UBE2L2-201ENST00000254302 429 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 SMIM11P1-201ENST00000369586 178 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RNU6-946P-201ENST00000383878 107 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RPL21P17-201ENST00000397467 475 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RN7SKP123-201ENST00000410732 291 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RPL7P46-201ENST00000425129 740 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RPL23AP82-202ENST00000427528 469 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC093106.2-201ENST00000428212 385 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 PRDX3P3-201ENST00000447765 522 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 NUTF2P3-201ENST00000448540 384 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC079448.1-201ENST00000449377 373 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms