Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RPL21P41-201ENST00000459863 264 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RPL9P32-201ENST00000464118 620 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC068781.1-201ENST00000488231 618 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RN7SKP276-201ENST00000516242 268 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC131281.1-201ENST00000522984 164 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC022616.4-201ENST00000522985 181 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AP000827.1-201ENST00000527814 258 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 OR4H12P-201ENST00000556269 907 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RN7SL652P-201ENST00000577769 300 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 DDX18P3-201ENST00000404856 2007 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AL672167.1-203ENST00000641299 2975 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC093535.2-201ENST00000624769 2326 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.151-201ENST00000363566 112 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RNU6-288P-201ENST00000363690 104 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RNU6-1329P-201ENST00000365664 107 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.480-201ENST00000384364 102 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC097374.1-203ENST00000400783 485 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RN7SKP267-201ENST00000410381 285 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RNU6-712P-201ENST00000410558 100 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AL138785.1-201ENST00000425821 331 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RPL21P2-201ENST00000440049 481 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 RPS24P13-201ENST00000442520 397 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 TPT1P13-201ENST00000449760 499 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 snoU13.3-201ENST00000459441 104 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC084783.1-201ENST00000565846 910 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC109446.1-201ENST00000566172 220 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC015912.2-201ENST00000571053 181 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 MIR15A-201ENST00000607334 83 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 AC020634.1-201ENST00000608701 549 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 SDR42E1P2-201ENST00000614861 481 ntBASIC4.37□□□□□ -1.71
NUP43Q8NFH3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP43Q8NFH3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RNU6-874P-201ENST00000362390 105 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RNU6-472P-201ENST00000384299 107 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 MIR141-201ENST00000384975 95 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RNU2-3P-201ENST00000410144 191 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RNU2-43P-201ENST00000410306 190 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC016397.1-201ENST00000412463 242 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 SYF2P2-201ENST00000417620 583 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC245028.1-201ENST00000423259 256 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC073063.1-201ENST00000434352 607 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 HSFY6P-201ENST00000445573 403 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 CHEK2P4-201ENST00000450340 246 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RPS11P1-201ENST00000451072 473 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC009220.1-201ENST00000451614 275 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RNU6-953P-201ENST00000459154 107 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RPL37P6-201ENST00000460682 294 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms