Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 HMGB3P8-201ENST00000449709 577 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 MTATP6P7-201ENST00000453315 681 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RPL12P25-201ENST00000455592 494 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RPL32P34-201ENST00000486380 400 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC025458.1-201ENST00000506046 166 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 PGAM1P13-201ENST00000507497 754 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 HMGN1P11-201ENST00000508668 303 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 PARP4P3-201ENST00000510265 317 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 SCARNA16.4-201ENST00000516956 187 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 RNU1-54P-201ENST00000517181 120 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 IGKV3D-25-201ENST00000519599 235 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AP005597.4-201ENST00000526762 229 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AP000648.1-201ENST00000529682 397 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC011487.3-201ENST00000593607 453 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 FAM27E4-201ENST00000605259 342 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AL353621.2-201ENST00000605340 133 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 AC023043.4-201ENST00000612081 449 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 uc_338.32-201ENST00000615087 172 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN3Q8NCR9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 FRG1CP-201ENST00000358464 769 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 RNA5SP500-201ENST00000364486 119 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 Y_RNA.259-201ENST00000364619 101 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 RNU6-1329P-201ENST00000365664 107 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 RNU6-601P-201ENST00000384540 107 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 MIR621-201ENST00000384919 96 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 MTCYBP4-201ENST00000401524 249 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 RNU6-370P-201ENST00000411008 104 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AL096701.2-201ENST00000416920 238 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 Z74021.1-201ENST00000423610 407 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AC093655.2-201ENST00000425735 631 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AL590664.1-201ENST00000448065 339 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 OR1H1P-201ENST00000448731 937 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AL691482.1-201ENST00000453255 87 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AC020593.1-201ENST00000507399 299 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 HIGD1AP14-201ENST00000507617 282 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 Y_RNA.701-201ENST00000516812 110 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 RNU6-703P-201ENST00000516946 107 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AC079905.1-201ENST00000549280 475 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 MIR3609-201ENST00000582661 80 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 AL138895.2-201ENST00000603019 178 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN3Q8NCR9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 ZNF137P-201ENST00000456718 1920 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RNU1-43P-201ENST00000365052 165 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 SNORA2.3-201ENST00000383920 135 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RNU6-95P-201ENST00000384697 107 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 SKA2P1-201ENST00000425592 390 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC115283.1-201ENST00000427353 400 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC018644.1-201ENST00000429934 551 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RPL23AP24-201ENST00000458203 385 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RPL30P14-201ENST00000482744 348 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms