Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC090115.3-201ENST00000553218 849 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 ATP1B3P1-201ENST00000605365 821 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 AC004805.2-201ENST00000605382 482 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 AC012443.1-201ENST00000605605 231 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 AL021879.1-201ENST00000611756 288 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 AC141273.2-201ENST00000618989 130 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 MIR492-201ENST00000638676 116 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 MAPK10-349ENST00000641767 3661 ntBASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMEFF1Q8IYR6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.46□□□□□ -1.69
TMEFF1Q8IYR6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.46□□□□□ -1.69
TMEFF1Q8IYR6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TMEFF1Q8IYR6 AC107068.1-201ENST00000563286 4218 ntBASIC4.46□□□□□ -1.69
TMEFF1Q8IYR6 MTND5P7-201ENST00000413558 1798 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 MIR331-201ENST00000362302 94 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RNU1-35P-201ENST00000362782 153 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 Y_RNA.473-201ENST00000384333 102 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RNU2-23P-201ENST00000410545 195 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RPS15AP40-201ENST00000419621 391 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 USMG5P1-201ENST00000425964 177 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 HSFY6P-201ENST00000445573 403 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RPL36AP13-201ENST00000457490 317 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 DYNLL1P5-201ENST00000467158 270 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RPS27AP1-201ENST00000475545 471 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RNU6-406P-201ENST00000516470 107 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RNU6-1069P-201ENST00000516612 133 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RNU6-1092P-201ENST00000516955 87 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 RNU6-64P-201ENST00000517119 105 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC023157.2-201ENST00000540596 141 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC092470.1-201ENST00000546187 132 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 MIR5692C1-201ENST00000585309 91 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC006272.2-201ENST00000594725 163 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC113403.1-201ENST00000604910 193 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 U2.17-201ENST00000611454 95 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC125257.1-201ENST00000560400 2930 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC006971.1-201ENST00000407916 4486 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 AC004944.1-201ENST00000517807 3059 ntBASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEFF1Q8IYR6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 SNORA63.1-201ENST00000362493 131 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 Y_RNA.424-201ENST00000384063 103 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 U3.35-201ENST00000408405 208 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RNA5SP107-201ENST00000411358 122 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RPL30P3-201ENST00000424262 333 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 CKS1BP6-201ENST00000424932 240 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RPL23AP69-201ENST00000431134 458 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RPL12P46-201ENST00000436610 195 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC104472.2-201ENST00000469035 601 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RN7SL132P-201ENST00000478131 296 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC108078.2-201ENST00000510750 236 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RNU6-307P-201ENST00000516743 106 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC131281.1-201ENST00000522984 164 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 TRAV8-5-201ENST00000537369 341 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AL121576.1-201ENST00000556055 276 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC012603.1-201ENST00000606424 528 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 AC015914.2-201ENST00000618167 288 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 uc_338.13-201ENST00000618243 179 ntBASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEFF1Q8IYR6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms