Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNU4-9P-201ENST00000364951 139 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RNU1-74P-201ENST00000384108 171 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RN7SKP125-201ENST00000410481 302 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RPL7AP73-201ENST00000413490 353 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AC073901.1-201ENST00000462471 408 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AC100832.1-201ENST00000471945 383 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RN7SL547P-201ENST00000490793 290 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RNU6-927P-201ENST00000516199 100 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 SNORD116-25-201ENST00000516517 92 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RPL21P9-201ENST00000556149 474 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 MIR3684-201ENST00000579779 74 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 MIR4423-201ENST00000580922 80 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AC060766.3-201ENST00000591442 263 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AP000769.2-201ENST00000602344 396 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AL139395.1-201ENST00000603662 160 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RPL23AP88-201ENST00000605759 454 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AL139124.1-201ENST00000609123 421 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AC116447.1-201ENST00000613153 453 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 MIR8080-201ENST00000622224 89 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AL451142.2-201ENST00000429076 2090 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AL445487.1-201ENST00000415694 1580 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 RNU6-318P-201ENST00000384283 103 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 RPS4XP3-201ENST00000398541 413 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 LAP3P1-201ENST00000403648 294 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 RPL23AP26-201ENST00000412728 464 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AL592148.1-201ENST00000413568 445 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 SRSF1P1-201ENST00000424058 520 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC024067.1-201ENST00000426199 223 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 UQCRBP2-201ENST00000447827 297 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 RN7SL197P-201ENST00000466981 299 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 HMGB3P16-201ENST00000508037 287 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC091912.1-201ENST00000511351 248 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 MIR5692C2-201ENST00000577959 77 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AL161629.2-201ENST00000615347 275 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 NCAPGP1-201ENST00000505112 1814 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC233981.2-201ENST00000611524 1614 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AL109809.4-201ENST00000603520 2185 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 AC083899.1-201ENST00000454465 3819 ntBASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.73□□□□□ -1.49
SCUBE3Q8IX30 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 ABCC13-202ENST00000463099 3842 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 MIR412-201ENST00000362142 91 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 RNU6-222P-201ENST00000362438 107 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 RNA5SP453-201ENST00000362503 119 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 Y_RNA.127-201ENST00000363386 109 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 Y_RNA.136-201ENST00000363444 102 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 RNU6-879P-201ENST00000364328 108 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 Y_RNA.446-201ENST00000384178 104 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 AL390729.2-201ENST00000416137 156 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 AL772161.1-201ENST00000439130 476 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 KNOP1P3-201ENST00000446933 426 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 RN7SL189P-201ENST00000468631 289 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 SCARNA16.4-201ENST00000516956 187 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 SNORA31.22-201ENST00000517204 135 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 AC233702.2-202ENST00000562547 291 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 AC005046.1-201ENST00000608515 625 ntBASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCUBE3Q8IX30 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.71□□□□□ -1.49
SCUBE3Q8IX30 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SCUBE3Q8IX30 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms