Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 HMGB3P11-201ENST00000440127 604 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 NUTF2P3-201ENST00000448540 384 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 FABP5P15-201ENST00000453566 214 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 CACYBPP2-201ENST00000453625 678 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AL356010.1-201ENST00000456364 102 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AL121769.1-201ENST00000469473 401 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 SNORA40.12-201ENST00000516329 111 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 Y_RNA.704-201ENST00000516851 102 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 TVP23BP1-201ENST00000557500 617 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC012507.3-201ENST00000603556 477 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC007546.1-201ENST00000619452 559 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC011155.2-201ENST00000623202 216 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 AC025034.2-201ENST00000623264 286 ntBASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.97□□□□□ -1.77
PPP4R4Q6NUP7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PPP4R4Q6NUP7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.96□□□□□ -1.77
PPP4R4Q6NUP7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.96□□□□□ -1.77
PPP4R4Q6NUP7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PPP4R4Q6NUP7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RNA5SP509-201ENST00000364577 119 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 SNORD115-7-201ENST00000365306 82 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 MIR3065-201ENST00000390137 79 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RNU4-25P-201ENST00000410569 230 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC099548.1-201ENST00000421443 426 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 USP9YP18-201ENST00000425912 695 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AL162395.1-201ENST00000457882 422 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RPS29P15-201ENST00000458329 171 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 snoU13.28-201ENST00000459235 104 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RPL35AP15-201ENST00000468042 339 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC233702.1-201ENST00000482905 502 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RPL39P36-201ENST00000490784 156 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC026979.1-201ENST00000492525 396 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RN7SL810P-201ENST00000493031 276 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC092436.1-201ENST00000506450 503 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 RBBP4P6-201ENST00000508098 202 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 SNORA31.9-201ENST00000516429 84 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 OR5AQ1P-201ENST00000527596 927 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AP005435.4-201ENST00000529514 284 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 OR5AL2P-201ENST00000532185 920 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 MIR4697-201ENST00000582977 78 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC008521.1-201ENST00000587471 187 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC007621.1-201ENST00000604544 437 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC130324.3-201ENST00000614165 542 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AC011944.2-201ENST00000624440 683 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 AL359693.1-201ENST00000614959 2407 ntBASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PPP4R4Q6NUP7 ELF2P3-201ENST00000445099 1506 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 API5P2-201ENST00000397055 1498 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 MIR331-201ENST00000362302 94 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 RNU6-179P-201ENST00000363350 107 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 RNU6-288P-201ENST00000363690 104 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 RNU6-512P-201ENST00000364438 103 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AL591416.1-201ENST00000404015 867 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AL590002.1-201ENST00000406554 418 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 RPS12P24-201ENST00000412619 387 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AL109913.1-201ENST00000421173 514 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 EIF1P1-201ENST00000421436 341 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AL714022.1-201ENST00000439897 151 ntBASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.95□□□□□ -1.78
PPP4R4Q6NUP7 AC027673.1-201ENST00000456245 405 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 304.2 ms