Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RPS29P17-201ENST00000430795 166 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 GTF2IP20-201ENST00000431663 360 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 Z82210.1-201ENST00000440037 231 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 ELOCP23-201ENST00000452014 332 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AL136097.1-201ENST00000456945 913 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNA5SP310-201ENST00000459084 116 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 snoU13.1-201ENST00000459157 104 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 FAM92A1P2-202ENST00000504766 877 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC117522.3-201ENST00000507974 584 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 PCBP2P3-201ENST00000509726 843 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNA5SP49-201ENST00000516450 115 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNA5SP519-201ENST00000516480 119 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNA5SP290-201ENST00000517133 127 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 CASP1P1-201ENST00000526345 212 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AP005435.4-201ENST00000529514 284 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 GNRHR2P1-201ENST00000555315 631 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AL121576.1-201ENST00000556055 276 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 MIR4330-201ENST00000579077 105 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AL670379.4-201ENST00000605279 254 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC002553.4-201ENST00000616896 331 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AL049641.1-201ENST00000441055 1948 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 Y_RNA.38-201ENST00000362617 102 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RNU6-534P-201ENST00000364877 106 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 Y_RNA.295-201ENST00000364918 102 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 MIR184-201ENST00000384962 84 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RNU6-903P-201ENST00000391270 109 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AP000567.1-201ENST00000406413 156 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RNA5SP111-201ENST00000411386 101 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 OR6C66P-201ENST00000414917 930 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC092047.1-201ENST00000424997 240 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 HMGB3P8-201ENST00000449709 577 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AL118520.1-201ENST00000450770 291 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RPL21P8-201ENST00000465083 535 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RPS15AP34-201ENST00000487776 387 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC109927.2-201ENST00000506416 303 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC008958.1-201ENST00000511047 682 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC068135.2-201ENST00000569293 1028 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 BNIP3P30-201ENST00000601184 574 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC092628.2-201ENST00000622492 339 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 AC027309.3-201ENST00000623419 351 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF220Q5VTB9 MTND4P14-201ENST00000435799 1354 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 IPO8P1-201ENST00000455509 3109 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 FAM35BP-202ENST00000497389 3337 ntBASIC3.85□□□□□ -1.79
RNF220Q5VTB9 TPTE2P4-201ENST00000258589 1605 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RNU6-552P-201ENST00000362869 119 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RNY3P3-201ENST00000363816 102 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 MIR325-201ENST00000385260 98 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RNU6-550P-201ENST00000391057 101 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AL590704.1-201ENST00000402856 794 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RNU4-46P-201ENST00000410818 138 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC009480.2-201ENST00000422916 432 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AL512844.2-201ENST00000433990 593 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 SNRPEP4-201ENST00000435815 279 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 HSPD1P21-201ENST00000436541 245 ntBASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF220Q5VTB9 CEACAMP4-201ENST00000457676 421 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms