Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC008758.3-201ENST00000507003 1829 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC083843.2-201ENST00000568248 6253 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 RNA5SP391-201ENST00000363456 119 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 RNVU1-3-201ENST00000364313 161 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-275P-201ENST00000364910 107 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-211P-201ENST00000384047 107 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 SNORA20-201ENST00000384662 132 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 RNA5SP339-201ENST00000390987 122 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 LAP3P1-201ENST00000403648 294 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 SNORD56-201ENST00000413522 71 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC099336.2-201ENST00000422457 254 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AL031736.2-201ENST00000426573 787 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC099560.2-201ENST00000457554 255 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-1218P-201ENST00000458990 108 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 SNORA70.11-201ENST00000515987 138 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 SNORA70.13-201ENST00000516116 138 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC137627.1-201ENST00000545761 289 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 MIR5582-201ENST00000579697 68 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 MIR6864-201ENST00000617935 70 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC118658.2-201ENST00000618697 459 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 MAPK10-338ENST00000641647 3362 ntBASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNFT1Q5M7Z0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC000374.1-201ENST00000434698 1745 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-899P-201ENST00000363947 107 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RNU1-59P-201ENST00000364829 162 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 Y_RNA.420-201ENST00000384043 110 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-76P-201ENST00000384060 104 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AL133388.1-201ENST00000404509 287 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 SRSF1P1-201ENST00000424058 520 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RPS15AP7-201ENST00000439294 405 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 IFNA11P-201ENST00000446352 526 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RPS29P27-201ENST00000463711 170 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RN7SL610P-201ENST00000463845 291 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 TOMM22P6-201ENST00000465035 409 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 SNORA40.9-201ENST00000515895 93 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-589P-201ENST00000516485 107 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 DNAJC19P2-201ENST00000593340 302 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC008814.1-201ENST00000603797 406 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC024940.4-201ENST00000605507 246 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 U1.25-201ENST00000614085 162 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 AC109583.2-201ENST00000617367 129 ntBASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNFT1Q5M7Z0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms