Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC007424.1-203ENST00000554613 687 ntBASIC3.45□□□□□ -1.86
LTBQ06643 OR4T1P-201ENST00000554933 911 ntBASIC3.45□□□□□ -1.86
LTBQ06643 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.45□□□□□ -1.86
LTBQ06643 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 AC098848.2-201ENST00000588023 330 ntBASIC3.45□□□□□ -1.86
LTBQ06643 AC018638.8-201ENST00000588755 281 ntBASIC3.45□□□□□ -1.86
LTBQ06643 U3.45-201ENST00000607547 219 ntBASIC3.45□□□□□ -1.86
LTBQ06643 DISC2.1-201ENST00000612827 205 ntBASIC3.45□□□□□ -1.86
LTBQ06643 AL136221.1-201ENST00000621449 509 ntBASIC3.45□□□□□ -1.86
LTBQ06643 MIR4496-201ENST00000635896 61 ntBASIC3.45□□□□□ -1.86
LTBQ06643 U6.105-201ENST00000637379 88 ntBASIC3.45□□□□□ -1.86
LTBQ06643 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LTBQ06643 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 AC009902.3-201ENST00000606235 2172 ntBASIC3.45□□□□□ -1.86
LTBQ06643 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LTBQ06643 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.44□□□□□ -1.86
LTBQ06643 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.44□□□□□ -1.86
LTBQ06643 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.44□□□□□ -1.86
LTBQ06643 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LTBQ06643 MIR423-201ENST00000362201 94 ntBASIC3.44□□□□□ -1.86
LTBQ06643 RNU6-1097P-201ENST00000363586 107 ntBASIC3.44□□□□□ -1.86
LTBQ06643 SNORD81.2-201ENST00000365153 76 ntBASIC3.44□□□□□ -1.86
LTBQ06643 U1.1-201ENST00000384101 164 ntBASIC3.44□□□□□ -1.86
LTBQ06643 MIR30B-201ENST00000384850 88 ntBASIC3.44□□□□□ -1.86
LTBQ06643 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LTBQ06643 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 AL138878.1-201ENST00000405131 347 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AL354719.1-201ENST00000406535 843 ntBASIC3.44□□□□□ -1.86
LTBQ06643 RNU2-15P-201ENST00000410692 191 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AC096664.2-201ENST00000411843 406 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.44□□□□□ -1.86
LTBQ06643 RPL31P2-201ENST00000413849 377 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 RPL36AP53-201ENST00000432891 316 ntBASIC3.44□□□□□ -1.86
LTBQ06643 TIMM9P1-201ENST00000436122 256 ntBASIC3.44□□□□□ -1.86
LTBQ06643 RPL29P29-201ENST00000448725 423 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AL353691.1-201ENST00000451332 387 ntBASIC3.44□□□□□ -1.86
LTBQ06643 NANOGP10-201ENST00000453325 895 ntBASIC3.44□□□□□ -1.86
LTBQ06643 SNORD108-201ENST00000459332 71 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.44□□□□□ -1.86
LTBQ06643 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 RN7SKP83-201ENST00000516512 178 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 SUMO2P20-201ENST00000520803 283 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 HMGB1P6-201ENST00000569046 646 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AC015917.1-201ENST00000579654 510 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.44□□□□□ -1.86
LTBQ06643 MIR4795-201ENST00000584182 89 ntBASIC3.44□□□□□ -1.86
LTBQ06643 YWHAQP7-201ENST00000603536 658 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AL137849.1-201ENST00000604767 169 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AC004853.1-201ENST00000604902 698 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AL354950.2-201ENST00000617939 290 ntBASIC3.44□□□□□ -1.86
LTBQ06643 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.44□□□□□ -1.86
LTBQ06643 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LTBQ06643 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LTBQ06643 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.43□□□□□ -1.86
LTBQ06643 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.43□□□□□ -1.86
LTBQ06643 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 OR1S2-201ENST00000302592 978 ntBASIC3.43□□□□□ -1.86
LTBQ06643 U3.15-201ENST00000365398 212 ntBASIC3.43□□□□□ -1.86
LTBQ06643 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LTBQ06643 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.43□□□□□ -1.86
LTBQ06643 RNU6-39P-201ENST00000384344 107 ntBASIC3.43□□□□□ -1.86
LTBQ06643 MIR153-1-201ENST00000384914 90 ntBASIC3.43□□□□□ -1.86
LTBQ06643 SOD2P1-201ENST00000396543 562 ntBASIC3.43□□□□□ -1.86
LTBQ06643 RNA5SP239-201ENST00000410218 129 ntBASIC3.43□□□□□ -1.86
LTBQ06643 RHEBP3-201ENST00000411920 351 ntBASIC3.43□□□□□ -1.86
LTBQ06643 AC007390.1-201ENST00000415722 356 ntBASIC3.43□□□□□ -1.86
LTBQ06643 RPL21P109-201ENST00000422213 475 ntBASIC3.43□□□□□ -1.86
LTBQ06643 AP000907.1-201ENST00000428428 510 ntBASIC3.43□□□□□ -1.86
LTBQ06643 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms