Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR4293-201ENST00000584305 78 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.17□□□□□ -1.9
PDX1P52945 AP000860.1-201ENST00000605250 559 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC121334.2-201ENST00000605387 271 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC006566.1-201ENST00000608943 513 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC012531.5-201ENST00000611375 151 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC245517.5-201ENST00000611529 162 ntBASIC3.17□□□□□ -1.9
PDX1P52945 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDX1P52945 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 AC110801.1-201ENST00000623590 212 ntBASIC3.17□□□□□ -1.9
PDX1P52945 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.17□□□□□ -1.9
PDX1P52945 AC068137.4-201ENST00000638485 296 ntBASIC3.17□□□□□ -1.9
PDX1P52945 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
PDX1P52945 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDX1P52945 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.16□□□□□ -1.9
PDX1P52945 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 OR5J1P-201ENST00000313544 939 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RNU5E-1-201ENST00000362477 120 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
PDX1P52945 SNORA80A-201ENST00000363922 136 ntBASIC3.16□□□□□ -1.9
PDX1P52945 Y_RNA.194-201ENST00000363985 102 ntBASIC3.16□□□□□ -1.9
PDX1P52945 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 DEFB109C-201ENST00000382575 264 ntBASIC3.16□□□□□ -1.9
PDX1P52945 DEFB109B-201ENST00000382656 264 ntBASIC3.16□□□□□ -1.9
PDX1P52945 SNORA36C-201ENST00000384289 132 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RNU6-328P-201ENST00000390887 106 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AL109755.1-201ENST00000401791 649 ntBASIC3.16□□□□□ -1.9
PDX1P52945 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.16□□□□□ -1.9
PDX1P52945 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC007283.2-201ENST00000424739 197 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.16□□□□□ -1.9
PDX1P52945 RPL35AP22-201ENST00000436855 335 ntBASIC3.16□□□□□ -1.9
PDX1P52945 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 AC244505.5-201ENST00000443639 207 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC008264.1-201ENST00000447612 367 ntBASIC3.16□□□□□ -1.9
PDX1P52945 NANOGNBP1-201ENST00000448444 480 ntBASIC3.16□□□□□ -1.9
PDX1P52945 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.16□□□□□ -1.9
PDX1P52945 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.16□□□□□ -1.9
PDX1P52945 CFTRP1-201ENST00000456646 183 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.16□□□□□ -1.9
PDX1P52945 TPTE2P5-203ENST00000458118 728 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RPL23AP67-201ENST00000465341 474 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RN7SL330P-201ENST00000469709 307 ntBASIC3.16□□□□□ -1.9
PDX1P52945 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 NDUFB4P2-201ENST00000509515 391 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
PDX1P52945 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.16□□□□□ -1.9
PDX1P52945 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.16□□□□□ -1.9
PDX1P52945 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.16□□□□□ -1.9
PDX1P52945 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 AC105224.1-201ENST00000587055 421 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 AC011468.4-201ENST00000603942 409 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC106900.2-201ENST00000604994 317 ntBASIC3.16□□□□□ -1.9
PDX1P52945 RNU6-87P-201ENST00000607561 108 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AL451064.1-201ENST00000607718 471 ntBASIC3.16□□□□□ -1.9
PDX1P52945 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 AC093838.1-201ENST00000613014 469 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AC100793.4-201ENST00000613683 429 ntBASIC3.16□□□□□ -1.9
PDX1P52945 AP001506.1-201ENST00000615444 211 ntBASIC3.16□□□□□ -1.9
PDX1P52945 uc_338.12-201ENST00000616344 181 ntBASIC3.16□□□□□ -1.9
PDX1P52945 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDX1P52945 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
PDX1P52945 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDX1P52945 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.9
PDX1P52945 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.9
PDX1P52945 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
PDX1P52945 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDX1P52945 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PDX1P52945 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.91
PDX1P52945 RNY4P34-201ENST00000364779 95 ntBASIC3.15□□□□□ -1.91
PDX1P52945 RNY3P13-201ENST00000365542 102 ntBASIC3.15□□□□□ -1.91
PDX1P52945 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDX1P52945 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.15□□□□□ -1.91
PDX1P52945 Y_RNA.559-201ENST00000384686 107 ntBASIC3.15□□□□□ -1.91
PDX1P52945 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PDX1P52945 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.15□□□□□ -1.91
PDX1P52945 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.15□□□□□ -1.91
PDX1P52945 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDX1P52945 RPS15AP12-201ENST00000419498 388 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
PDX1P52945 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.15□□□□□ -1.91
PDX1P52945 RPL23AP69-201ENST00000431134 458 ntBASIC3.15□□□□□ -1.91
PDX1P52945 BX679664.1-201ENST00000434429 253 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC009961.2-201ENST00000435771 251 ntBASIC3.15□□□□□ -1.91
PDX1P52945 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.15□□□□□ -1.91
PDX1P52945 MTCO3P45-201ENST00000443036 613 ntBASIC3.15□□□□□ -1.91
PDX1P52945 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
PDX1P52945 GAPDHP17-201ENST00000449858 1001 ntBASIC3.15□□□□□ -1.91
PDX1P52945 MTND1P27-201ENST00000451117 902 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms