Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 USP9YP29-201ENST00000445112 563 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH3P22223 AL592447.1-201ENST00000447592 540 ntBASIC3.18□□□□□ -1.9
CDH3P22223 CENPBD1P1-201ENST00000464061 469 ntBASIC3.18□□□□□ -1.9
CDH3P22223 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH3P22223 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH3P22223 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH3P22223 AC026801.2-201ENST00000515352 425 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC022447.1-201ENST00000515358 464 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH3P22223 AC022616.6-201ENST00000520479 119 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH3P22223 AC022878.1-201ENST00000530684 149 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AP000907.2-201ENST00000530827 353 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AP003122.4-201ENST00000530980 758 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH3P22223 HIGD1AP1-201ENST00000550979 275 ntBASIC3.18□□□□□ -1.9
CDH3P22223 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH3P22223 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH3P22223 AL356432.3-201ENST00000568952 465 ntBASIC3.18□□□□□ -1.9
CDH3P22223 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC012443.1-201ENST00000605605 231 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
CDH3P22223 RN7SKP299-201ENST00000606679 301 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AL157817.1-201ENST00000614264 790 ntBASIC3.18□□□□□ -1.9
CDH3P22223 MIR7112-201ENST00000616126 65 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AC009268.2-201ENST00000621925 457 ntBASIC3.18□□□□□ -1.9
CDH3P22223 AL159972.1-201ENST00000625150 448 ntBASIC3.18□□□□□ -1.9
CDH3P22223 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDH3P22223 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH3P22223 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH3P22223 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH3P22223 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH3P22223 AC091564.4-201ENST00000533934 2194 ntBASIC3.17□□□□□ -1.9
CDH3P22223 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH3P22223 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH3P22223 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH3P22223 Y_RNA.553-201ENST00000384670 102 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AL357075.1-201ENST00000404107 726 ntBASIC3.17□□□□□ -1.9
CDH3P22223 FAT1P1-201ENST00000406588 507 ntBASIC3.17□□□□□ -1.9
CDH3P22223 RNU6-516P-201ENST00000411381 104 ntBASIC3.17□□□□□ -1.9
CDH3P22223 HMGN1P14-201ENST00000412459 517 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC063979.1-201ENST00000415539 377 ntBASIC3.17□□□□□ -1.9
CDH3P22223 PPP1R11P2-201ENST00000423543 382 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 AC024082.2-201ENST00000434771 238 ntBASIC3.17□□□□□ -1.9
CDH3P22223 RPL22P17-201ENST00000438729 315 ntBASIC3.17□□□□□ -1.9
CDH3P22223 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 RPL23AP31-201ENST00000456160 467 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 AC135721.1-201ENST00000497954 479 ntBASIC3.17□□□□□ -1.9
CDH3P22223 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH3P22223 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 SNORA31.22-201ENST00000517204 135 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
CDH3P22223 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH3P22223 AC064807.4-201ENST00000607201 407 ntBASIC3.17□□□□□ -1.9
CDH3P22223 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH3P22223 SNORD39.4-201ENST00000620099 78 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC009878.1-201ENST00000621819 340 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC090582.1-201ENST00000636321 199 ntBASIC3.17□□□□□ -1.9
CDH3P22223 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH3P22223 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
CDH3P22223 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
CDH3P22223 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH3P22223 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDH3P22223 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CDH3P22223 Y_RNA.201-201ENST00000364052 96 ntBASIC3.16□□□□□ -1.9
CDH3P22223 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH3P22223 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CDH3P22223 SNORA9-201ENST00000384215 133 ntBASIC3.16□□□□□ -1.9
CDH3P22223 MIR483-201ENST00000385070 76 ntBASIC3.16□□□□□ -1.9
CDH3P22223 RNU6-754P-201ENST00000391166 107 ntBASIC3.16□□□□□ -1.9
CDH3P22223 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.16□□□□□ -1.9
CDH3P22223 Y_RNA.598-201ENST00000410480 95 ntBASIC3.16□□□□□ -1.9
CDH3P22223 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL353706.1-201ENST00000436728 494 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL031667.1-201ENST00000440222 725 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 PGBD4P3-201ENST00000440731 581 ntBASIC3.16□□□□□ -1.9
CDH3P22223 RPL26P6-201ENST00000440913 438 ntBASIC3.16□□□□□ -1.9
CDH3P22223 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH3P22223 AL121871.1-201ENST00000443413 436 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL590664.1-201ENST00000448065 339 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH3P22223 MTCO2P18-201ENST00000457151 658 ntBASIC3.16□□□□□ -1.9
CDH3P22223 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 RNU6-956P-201ENST00000458868 103 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms