Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 SNURFL-201ENST00000309296 343 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 MIR626-201ENST00000385032 94 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AL133388.1-201ENST00000404509 287 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AL035079.1-201ENST00000405210 287 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 RNU4-65P-201ENST00000410473 140 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 MYL6P5-201ENST00000412707 459 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AL034379.1-201ENST00000423216 253 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 USP9YP7-201ENST00000436723 430 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 FHP1-201ENST00000442741 703 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA3O60609 USP9YP32-201ENST00000452432 430 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 PPIAP21-201ENST00000464473 501 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.43□□□□□ -1.54
GFRA3O60609 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.43□□□□□ -1.54
GFRA3O60609 RN7SKP43-201ENST00000516173 320 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AC021006.3-201ENST00000530771 192 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA3O60609 AC023575.1-201ENST00000580510 358 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 AC010632.3-201ENST00000611377 369 ntBASIC5.43□□□□□ -1.54
GFRA3O60609 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA3O60609 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
GFRA3O60609 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA3O60609 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA3O60609 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
GFRA3O60609 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA3O60609 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
GFRA3O60609 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA3O60609 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA3O60609 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA3O60609 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
GFRA3O60609 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA3O60609 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
GFRA3O60609 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 U6atac.2-201ENST00000408644 118 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 AL117339.3-201ENST00000418733 162 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 RNU1-88P-201ENST00000459274 128 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 AC092824.1-201ENST00000483524 576 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 BTF3L4P4-201ENST00000506381 449 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA3O60609 RNA5SP165-201ENST00000517142 115 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 IGHV1-14-201ENST00000523391 241 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 AC073916.1-201ENST00000545095 130 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA3O60609 CYP4A27P-201ENST00000567218 190 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 RPL23AP87-202ENST00000573039 466 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.42□□□□□ -1.54
GFRA3O60609 VN1R84P-201ENST00000593697 235 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 AL391813.1-201ENST00000603098 260 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.42□□□□□ -1.54
GFRA3O60609 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
GFRA3O60609 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 AC020656.2-201ENST00000613291 5309 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 AL121768.1-201ENST00000613917 2544 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 DDX10P1-201ENST00000448545 1933 ntBASIC5.42□□□□□ -1.54
GFRA3O60609 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
GFRA3O60609 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA3O60609 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA3O60609 AL731556.1-201ENST00000394628 3711 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 SDAD1P1-202ENST00000524156 2051 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 THAP12P9-201ENST00000503971 2360 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
GFRA3O60609 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
GFRA3O60609 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA3O60609 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 RNU4-10P-201ENST00000364383 140 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 Y_RNA.281-201ENST00000364774 94 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 Y_RNA.393-201ENST00000383936 102 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 Y_RNA.572-201ENST00000384757 98 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 RNU6-763P-201ENST00000390865 106 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 RNA5SP332-201ENST00000391063 115 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 SNORA75.5-201ENST00000391291 81 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms