Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC012507.3-201ENST00000603556 477 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AC106900.2-201ENST00000604994 317 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF3O43395 U7.8-201ENST00000619968 63 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 LRRC77P-213ENST00000637727 880 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF3O43395 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AC119674.1-207ENST00000641355 633 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF3O43395 AL136164.4-201ENST00000625013 2135 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF3O43395 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PRPF3O43395 FAM35BP-202ENST00000497389 3337 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 RNA5SP42-201ENST00000364278 115 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF3O43395 MIR134-201ENST00000385258 73 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PRPF3O43395 RPL21P17-201ENST00000397467 475 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 ATP5A1P2-201ENST00000412323 255 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 FCF1P9-201ENST00000412546 282 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 UBE2V1P10-201ENST00000414685 269 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 TMEM167AP1-201ENST00000423409 219 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 MTCO3P30-201ENST00000426425 670 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF3O43395 SNRPEP4-201ENST00000435815 279 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 TAAR7P-201ENST00000436141 242 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 CBWD4P-201ENST00000445695 655 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 RPL23AP20-201ENST00000447965 421 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 RNU1-95P-201ENST00000516357 160 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 SCARNA24.1-201ENST00000516465 137 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 RNU1-128P-201ENST00000516704 160 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 RNU6-579P-201ENST00000516879 102 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF3O43395 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF3O43395 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF3O43395 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF3O43395 AL365204.3-201ENST00000612448 685 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 AC034102.8-201ENST00000615146 484 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 SEPT14P19-203ENST00000633205 211 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF3O43395 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PRPF3O43395 OR4G2P-202ENST00000641004 1759 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 AC006504.1-201ENST00000562493 3666 ntBASIC4.19□□□□□ -1.74
PRPF3O43395 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PRPF3O43395 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF3O43395 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF3O43395 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF3O43395 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF3O43395 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 TPTE2P4-201ENST00000258589 1605 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
PRPF3O43395 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 RNU6-283P-201ENST00000364788 107 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 RNU6-641P-201ENST00000384006 107 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRPF3O43395 MTCO3P40-201ENST00000392516 676 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 CALM2P2-201ENST00000428512 440 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 AL451074.3-201ENST00000437709 472 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 RPS3AP46-201ENST00000448352 682 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF3O43395 CEACAMP4-201ENST00000457676 421 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 RN7SL542P-201ENST00000467147 294 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 HMGN1P11-201ENST00000508668 303 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF3O43395 FAM92A1P1-201ENST00000528023 890 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF3O43395 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF3O43395 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF3O43395 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF3O43395 AC107304.1-201ENST00000604229 296 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AC006077.1-201ENST00000604746 343 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AL136363.1-201ENST00000605349 337 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AC107294.1-201ENST00000609524 467 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AL359880.1-201ENST00000621879 266 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AC039056.2-201ENST00000622261 511 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 CR381653.2-201ENST00000624041 768 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 OR5H6-203ENST00000642105 978 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF3O43395 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF3O43395 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF3O43395 AC007656.2-201ENST00000624902 4547 ntBASIC4.18□□□□□ -1.74
PRPF3O43395 AL353746.1-201ENST00000566293 6881 ntBASIC4.17□□□□□ -1.74
PRPF3O43395 MFSD8-236ENST00000641509 4050 ntBASIC4.17□□□□□ -1.74
PRPF3O43395 ZNF285B-201ENST00000561698 1767 ntBASIC4.17□□□□□ -1.74
PRPF3O43395 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.17□□□□□ -1.74
PRPF3O43395 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF3O43395 SNORD9-201ENST00000362566 104 ntBASIC4.17□□□□□ -1.74
PRPF3O43395 RNU6-282P-201ENST00000365357 103 ntBASIC4.17□□□□□ -1.74
PRPF3O43395 SNORD6-201ENST00000365444 73 ntBASIC4.17□□□□□ -1.74
PRPF3O43395 RNU1-39P-201ENST00000383897 165 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms