Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1AO00555 AC090774.1-201ENST00000435925 246 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1AO00555 AC104806.1-201ENST00000508720 308 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 AP003033.1-201ENST00000527244 415 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 AP005435.4-201ENST00000529514 284 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.2□□□□□ -2.22
CACNA1AO00555 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.2□□□□□ -2.22
CACNA1AO00555 SNRPGP17-201ENST00000603780 214 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 AC018630.2-201ENST00000534866 2403 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 MIR1304-201ENST00000408243 91 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.19□□□□□ -2.22
CACNA1AO00555 RNA5SP57-201ENST00000459463 123 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 RPL37P6-202ENST00000464216 403 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.19□□□□□ -2.22
CACNA1AO00555 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CACNA1AO00555 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.19□□□□□ -2.22
CACNA1AO00555 UBE2V1P9-201ENST00000414760 368 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 SNRPEP10-201ENST00000420249 274 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.19□□□□□ -2.22
CACNA1AO00555 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.19□□□□□ -2.22
CACNA1AO00555 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.19□□□□□ -2.22
CACNA1AO00555 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.19□□□□□ -2.22
CACNA1AO00555 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.19□□□□□ -2.22
CACNA1AO00555 OSBPL9P3-201ENST00000534523 595 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.19□□□□□ -2.22
CACNA1AO00555 VN1R107P-201ENST00000601784 209 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 AC017076.1-201ENST00000607613 578 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.19□□□□□ -2.22
CACNA1AO00555 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.19□□□□□ -2.22
CACNA1AO00555 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CACNA1AO00555 MTND5P7-201ENST00000413558 1798 ntBASIC1.19□□□□□ -2.22
CACNA1AO00555 RNU2-25P-201ENST00000411041 191 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CACNA1AO00555 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.18□□□□□ -2.22
CACNA1AO00555 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.18□□□□□ -2.22
CACNA1AO00555 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.18□□□□□ -2.22
CACNA1AO00555 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 MIR4711-201ENST00000578274 70 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 MIR3935-201ENST00000583472 104 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 RSL24D1P11-201ENST00000591045 491 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 AC009229.3-201ENST00000608056 282 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CACNA1AO00555 AP003499.2-201ENST00000624100 483 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 AC092159.4-201ENST00000624944 550 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.18□□□□□ -2.22
CACNA1AO00555 PABPC1P7-201ENST00000413177 1513 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CACNA1AO00555 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.18□□□□□ -2.22
CACNA1AO00555 RNA5SP402-201ENST00000517148 110 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 ABI1P1-201ENST00000603375 1120 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 AC010200.2-201ENST00000605098 235 ntBASIC1.18□□□□□ -2.22
CACNA1AO00555 MIR518A2-201ENST00000384966 87 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.17□□□□□ -2.22
CACNA1AO00555 AC022387.2-201ENST00000604050 448 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 RNU2-22P-201ENST00000411266 212 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.17□□□□□ -2.22
CACNA1AO00555 AC009901.1-201ENST00000506703 541 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 RNA5SP134-201ENST00000516492 96 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.17□□□□□ -2.22
CACNA1AO00555 AC123912.5-201ENST00000605470 343 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 AL512283.1-201ENST00000606756 1384 ntBASIC1.17□□□□□ -2.22
CACNA1AO00555 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
CACNA1AO00555 Z85995.1-201ENST00000415547 335 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.16□□□□□ -2.22
CACNA1AO00555 OR10R1P-201ENST00000441524 1141 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 RPL39P40-201ENST00000445481 146 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 AC010265.1-201ENST00000513509 211 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.16□□□□□ -2.22
CACNA1AO00555 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.16□□□□□ -2.22
CACNA1AO00555 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CACNA1AO00555 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.16□□□□□ -2.22
CACNA1AO00555 AC006270.2-201ENST00000578523 652 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.16□□□□□ -2.22
CACNA1AO00555 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CACNA1AO00555 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.16□□□□□ -2.22
CACNA1AO00555 AC005517.2-201ENST00000424673 553 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 CFTRP1-201ENST00000456646 183 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 AC089999.1-201ENST00000460336 374 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 TRAV31-201ENST00000502780 342 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CACNA1AO00555 MTND5P4-201ENST00000514978 288 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.16□□□□□ -2.22
CACNA1AO00555 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.16□□□□□ -2.22
CACNA1AO00555 MIR153-2-201ENST00000385225 87 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 Z86062.1-201ENST00000406773 777 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CACNA1AO00555 SEC63P1-201ENST00000425785 1258 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.15□□□□□ -2.23
CACNA1AO00555 SNORA31.26-201ENST00000517250 137 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC013244.2-201ENST00000603396 103 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC006213.5-201ENST00000619673 288 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 Z69720.2-201ENST00000624755 279 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC138649.5-201ENST00000637456 137 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 Y_RNA.228-201ENST00000364346 98 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 RNU6-1235P-201ENST00000384559 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms