Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 Y_RNA.116-201ENST00000363292 103 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNA5SP478-201ENST00000364657 115 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-1180P-201ENST00000364935 107 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-32P-201ENST00000383948 107 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-13P-201ENST00000384248 107 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-12P-201ENST00000384604 107 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-41P-201ENST00000384741 107 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNY4P30-201ENST00000410216 95 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 Y_RNA.595-201ENST00000410403 105 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 CYCSP10-201ENST00000417973 294 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC094019.1-201ENST00000434678 472 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 HLA-DPA3-207ENST00000454398 229 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC025458.1-201ENST00000506046 166 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 RNA5SP206-201ENST00000516703 121 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 MRPS21P8-201ENST00000569196 235 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 MIR4701-201ENST00000583094 63 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC005332.4-201ENST00000592752 579 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC007390.2-201ENST00000606229 3803 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC024255.1-201ENST00000614376 102 ntBASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA4Q9Y5G9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-78P-201ENST00000362897 107 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-249P-201ENST00000363016 102 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 snoU2_19.4-201ENST00000364329 80 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 SNORA5.1-201ENST00000384275 131 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 SNORA51.9-201ENST00000384295 124 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-712P-201ENST00000410558 100 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 AC016027.4-201ENST00000450866 277 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 NXT1P1-201ENST00000458481 316 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 IGKV3D-25-201ENST00000519599 235 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 AL358913.1-201ENST00000554342 121 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 AL357075.2-201ENST00000614906 189 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 FAM27E2-201ENST00000619668 403 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 MIR7159-201ENST00000620587 66 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 snoZ196.1-201ENST00000625269 89 ntBASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDHGA4Q9Y5G9 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 Y_RNA.101-201ENST00000363154 102 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 U8.10-201ENST00000384260 133 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AL160275.2-201ENST00000412010 394 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RPL12P12-201ENST00000424633 501 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AC092967.1-201ENST00000449016 481 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RPS29P24-201ENST00000486345 171 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AC007686.1-201ENST00000488511 463 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AC010343.2-201ENST00000510162 224 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 KHDC1P1-201ENST00000511053 508 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RN7SKP122-201ENST00000515923 296 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-1198P-201ENST00000516904 67 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 RNU6-58P-201ENST00000517143 103 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AP005639.1-201ENST00000526939 192 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 MIR4443-201ENST00000585052 53 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 AL138963.2-201ENST00000605137 226 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 MIR6768-201ENST00000610734 72 ntBASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
PCDHGA4Q9Y5G9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms