Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RPL23AP26-201ENST00000412728 464 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 RPL7P10-201ENST00000417407 739 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AL591212.2-201ENST00000433923 257 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 PRPS1P1-201ENST00000445305 876 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 RPS24P6-201ENST00000452670 400 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 RPL23AP31-201ENST00000456160 467 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AC092451.1-201ENST00000480211 153 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 MTCO1P29-201ENST00000496868 288 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 TRBVA-201ENST00000498804 316 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 RNU6-189P-201ENST00000516120 101 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 Y_RNA.691-201ENST00000516611 103 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 SNRPGP16-201ENST00000533275 226 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 OR11H5P-201ENST00000554039 926 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 IPO5P1-202ENST00000600039 287 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 AC021646.1-201ENST00000605469 484 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 Z82243.1-201ENST00000609432 473 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5□□□□□ -1.61
DDX41Q9UJV9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 RNU6-288P-201ENST00000363690 104 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 RNU6-434P-201ENST00000384376 107 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 SNORA70C-201ENST00000384538 135 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AL513331.1-201ENST00000411908 397 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5□□□□□ -1.61
DDX41Q9UJV9 NDUFA5P4-201ENST00000436704 385 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5□□□□□ -1.61
DDX41Q9UJV9 PRDX3P3-201ENST00000447765 522 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 RPS15AP27-201ENST00000449183 343 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5□□□□□ -1.61
DDX41Q9UJV9 HIGD1AP13-201ENST00000509878 289 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 SNORA31.3-201ENST00000516029 96 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 SNORA31.9-201ENST00000516429 84 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5□□□□□ -1.61
DDX41Q9UJV9 AP003730.1-201ENST00000524605 285 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC093027.1-201ENST00000546698 429 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC005951.2-201ENST00000576282 495 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC010928.3-201ENST00000587712 541 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AC079587.1-201ENST00000603846 277 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 AL445363.3-201ENST00000623080 671 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 FTO-223ENST00000640179 210 ntTSL 5 BASIC5□□□□□ -1.61
DDX41Q9UJV9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 AC015813.6-201ENST00000624409 5808 ntBASIC5□□□□□ -1.61
DDX41Q9UJV9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5□□□□□ -1.61
DDX41Q9UJV9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
DDX41Q9UJV9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
DDX41Q9UJV9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 RNU6-393P-201ENST00000384475 107 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 SNORD70.1-201ENST00000391007 85 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 MIR1290-201ENST00000408735 78 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 BX323014.1-201ENST00000412876 237 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 snoU13.4-201ENST00000458916 104 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 UQCRHP4-201ENST00000471686 272 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC026402.1-201ENST00000513642 170 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 RNU6-864P-201ENST00000516256 108 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 CYP4A43P-201ENST00000568156 121 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 MIR3921-201ENST00000577308 85 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC022893.3-201ENST00000607665 437 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AL442067.2-201ENST00000614033 363 ntBASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DDX41Q9UJV9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms