Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.49□□□□□ -1.85
HCN3Q9P1Z3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC066616.2-201ENST00000559334 1481 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AL161912.2-201ENST00000565707 3007 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 RNA5SP51-201ENST00000364750 119 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 RNU6-282P-201ENST00000365357 103 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 RNU6-641P-201ENST00000384006 107 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 MIR325-201ENST00000385260 98 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 RNA5SP44-201ENST00000410446 133 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC010975.2-201ENST00000427781 588 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 OR2AS1P-201ENST00000427827 319 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 CBWD4P-201ENST00000445695 655 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 SSXP4-201ENST00000451349 245 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 C1DP4-201ENST00000455429 424 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC105252.1-201ENST00000503089 286 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC026427.2-201ENST00000506228 536 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AL845331.3-202ENST00000562856 261 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 MIR4444-1-201ENST00000581696 74 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 MIR4444-2-201ENST00000584390 74 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 Z84480.1-201ENST00000605131 311 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC008962.1-201ENST00000605729 304 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AP002360.4-201ENST00000606980 481 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC015540.1-201ENST00000615828 501 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC084035.1-201ENST00000634543 607 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 CR848007.1-201ENST00000442354 1699 ntBASIC3.48□□□□□ -1.85
HCN3Q9P1Z3 AC090740.1-201ENST00000623193 2262 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 CUL1P1-201ENST00000509510 2425 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RNU6-181P-201ENST00000363225 107 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 SNORA73.2-201ENST00000364946 201 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RNU6-259P-201ENST00000383999 107 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RNU6-456P-201ENST00000384493 107 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 HSPE1P8-201ENST00000406997 288 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 HMGB1P27-201ENST00000431429 603 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 NEFMP1-201ENST00000443423 1006 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 VN1R34P-201ENST00000447387 883 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RPS3AP46-201ENST00000448352 682 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC004801.2-202ENST00000463559 283 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC010493.1-201ENST00000513479 292 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RNU6-445P-201ENST00000516949 107 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RN7SKP258-201ENST00000517151 304 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 IGKV2-23-201ENST00000518729 323 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 DUXAP2-201ENST00000519198 589 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC022880.1-201ENST00000534017 973 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC098848.2-201ENST00000588023 330 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC009570.1-201ENST00000609599 745 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AC084782.3-201ENST00000612282 578 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 AL390240.1-201ENST00000612950 384 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms