Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RAI1Q7Z5J4 AL138713.1-201ENST00000624026 2130 ntBASIC2.54□□□□□ -2
RAI1Q7Z5J4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAI1Q7Z5J4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RAI1Q7Z5J4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RAI1Q7Z5J4 ZNF826P-207ENST00000622273 1910 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 RNU6-501P-201ENST00000364072 100 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 RPL5P18-201ENST00000406671 891 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RNU2-43P-201ENST00000410306 190 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RPL17P12-201ENST00000413391 526 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC245054.2-201ENST00000415639 319 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC233728.2-201ENST00000425348 757 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 RPS25P9-201ENST00000435591 252 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC108734.1-201ENST00000439549 399 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 SNRPGP3-201ENST00000469405 227 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RN7SL429P-201ENST00000479090 223 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RN7SL489P-201ENST00000486185 223 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RN7SL327P-201ENST00000488659 223 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RN7SL20P-201ENST00000488827 297 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAI1Q7Z5J4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 RNU1-61P-201ENST00000516107 151 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC103783.1-201ENST00000520506 373 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC245166.1-201ENST00000521012 253 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 OR7K1P-201ENST00000546439 926 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 PIGPP4-201ENST00000584447 307 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 NRBF2P5-201ENST00000603087 788 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AP000811.1-201ENST00000603803 651 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC121334.2-201ENST00000605387 271 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 RN7SL853P-201ENST00000617250 223 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AL603755.1-201ENST00000619504 163 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 AP002791.1-201ENST00000623291 381 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAI1Q7Z5J4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAI1Q7Z5J4 MAPK10-373ENST00000641983 6772 ntBASIC2.53□□□□□ -2
RAI1Q7Z5J4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.53□□□□□ -2
RAI1Q7Z5J4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAI1Q7Z5J4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
RAI1Q7Z5J4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 RNU6-1155P-201ENST00000363554 107 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 RNU6-288P-201ENST00000363690 104 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 EI24P1-201ENST00000416584 867 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC005094.1-201ENST00000440420 368 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 RABEPKP1-201ENST00000440529 1026 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AL662791.1-201ENST00000441992 928 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 ARPC3P2-201ENST00000457786 533 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC004924.1-201ENST00000480160 781 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC104685.1-201ENST00000502445 371 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 RNU6-678P-201ENST00000516832 109 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 RN7SKP258-201ENST00000517151 304 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC034268.2-201ENST00000571784 482 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 OR4K8P-201ENST00000578842 1048 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AP005136.1-201ENST00000579765 429 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 ELOCP29-201ENST00000588193 334 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AL596327.1-201ENST00000603629 213 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC009878.1-201ENST00000621819 340 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC004944.1-201ENST00000517807 3059 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 GABRG2-229ENST00000641017 3628 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 DEFB108F-201ENST00000344638 222 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 SNORA51.2-201ENST00000364595 132 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 MIR1-2-201ENST00000384961 85 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 MT-TC-201ENST00000387405 66 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 AL139095.1-201ENST00000404326 391 ntBASIC2.52□□□□□ -2.01
RAI1Q7Z5J4 RNU4-65P-201ENST00000410473 140 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms