Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 RNU6-1322P-201ENST00000364309 107 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 Y_RNA.453-201ENST00000384223 109 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 MIR607-201ENST00000385241 96 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AL136116.1-201ENST00000403591 381 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 RNU2-39P-201ENST00000410604 198 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 MTCO1P20-201ENST00000425366 358 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 USP12PX-201ENST00000432383 1057 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AL606489.2-201ENST00000433886 234 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 HMGB3P12-201ENST00000438745 556 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 RPL23AP31-201ENST00000456160 467 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 CEACAMP4-201ENST00000457676 421 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 RPL23AP62-201ENST00000463396 453 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 VN1R105P-201ENST00000486595 910 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 MTAPP1-201ENST00000489154 819 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 PHBP14-201ENST00000512887 367 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 RNU6-390P-201ENST00000516259 103 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC109635.3-201ENST00000529536 185 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC093012.1-202ENST00000549403 582 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 MED28P6-201ENST00000558776 231 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC234778.2-201ENST00000566241 354 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 HMGB1P6-201ENST00000569046 646 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC008536.2-201ENST00000607284 349 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 MIR1321-201ENST00000637766 79 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC093536.2-201ENST00000565257 1406 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 PWAR6-201ENST00000552334 4618 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC073343.1-201ENST00000328239 651 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 SNORA31-201ENST00000362607 130 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU6-960P-201ENST00000364056 120 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNA5SP167-201ENST00000365461 116 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 SMIM11P1-201ENST00000369586 178 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU6-641P-201ENST00000384006 107 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 Y_RNA.481-201ENST00000384373 102 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 MIR937-201ENST00000401271 86 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 USP9YP27-201ENST00000418455 438 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 RAC1P6-201ENST00000423911 575 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 RPL21P66-201ENST00000426566 466 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 BNIP3P2-201ENST00000441221 577 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC114755.5-201ENST00000447760 831 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC083798.1-201ENST00000472671 131 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC126389.1-201ENST00000477436 290 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 HSPE1P6-201ENST00000479457 291 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU6-1178P-201ENST00000516674 107 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU6-352P-201ENST00000516908 107 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 RNU6-840P-201ENST00000517275 65 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms