Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDPF1Q6NVV7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDPF1Q6NVV7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.82-201ENST00000363000 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.92-201ENST00000363043 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNA5SP435-201ENST00000364044 108 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.235-201ENST00000364412 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNA5SP433-201ENST00000364491 114 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.275-201ENST00000364726 110 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.306-201ENST00000365015 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.312-201ENST00000365089 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.322-201ENST00000365151 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNU6-17P-201ENST00000384245 107 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNU6-804P-201ENST00000384286 107 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNU6-1117P-201ENST00000384525 104 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNU6-18P-201ENST00000384527 107 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNU6-918P-201ENST00000391219 106 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RN7SKP114-201ENST00000410327 279 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNU2-61P-201ENST00000411069 191 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AL359092.1-201ENST00000417156 265 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AL138785.1-201ENST00000425821 331 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 GAPDHP48-201ENST00000436626 961 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 POU5F1P5-201ENST00000445059 658 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.650-201ENST00000459002 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RN7SL39P-201ENST00000462264 297 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AC018797.1-201ENST00000510791 255 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 RNA5SP360-201ENST00000516555 118 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.777-201ENST00000516982 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AC027288.2-201ENST00000553028 243 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.771-201ENST00000598668 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 uc_338.31-201ENST00000615595 186 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.789-201ENST00000622480 102 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AC061999.1-201ENST00000624454 177 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 AL450345.1-202ENST00000605741 3881 ntBASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDPF1Q6NVV7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 AC008725.1-201ENST00000605123 2263 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.286-201ENST00000364813 102 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RNU6-336P-201ENST00000364891 107 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RNU1-84P-201ENST00000365447 164 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RNU6-356P-201ENST00000384140 107 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.569-201ENST00000384749 103 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 SNORA40C-201ENST00000391285 128 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 BTF3L4P2-201ENST00000392798 346 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 AL078599.1-201ENST00000402075 293 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RNU6-651P-201ENST00000411040 105 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RNU5A-5P-201ENST00000411054 116 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 CRIP1P1-201ENST00000427567 185 ntBASIC4.32□□□□□ -1.72
CDPF1Q6NVV7 RPS6P12-201ENST00000432491 726 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms