Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 RNA5SP191-201ENST00000362585 102 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 RNY3P11-201ENST00000364153 102 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 RNU4-42P-201ENST00000364738 142 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 RNA5SP240-201ENST00000365355 128 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 PCNPP3-201ENST00000393579 471 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 RNA5SP107-201ENST00000411358 122 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC114755.2-201ENST00000413520 361 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC108032.1-201ENST00000416706 207 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 EIF4HP2-201ENST00000424380 563 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 CALM2P2-201ENST00000428512 440 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 RPS26P2-201ENST00000440331 348 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 SNORD121B-201ENST00000458838 81 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 RPL23AP55-201ENST00000498163 452 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 RN7SKP122-201ENST00000515923 296 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC010900.2-201ENST00000604508 210 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 HMGN2P28-201ENST00000606102 262 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC243654.2-201ENST00000612843 443 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 SAMMSON-226ENST00000642089 1582 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AL592148.3-201ENST00000608771 2646 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 AC008758.3-201ENST00000507003 1829 ntBASIC5.02□□□□□ -1.61
RNF43Q68DV7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF43Q68DV7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF43Q68DV7 SNORD113-1-201ENST00000365321 69 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 Y_RNA.464-201ENST00000384282 110 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 RNU6-393P-201ENST00000384475 107 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 U3.30-201ENST00000391308 210 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 RNU6-293P-201ENST00000411259 106 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 RNU2-71P-201ENST00000411395 189 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 TBCAP2-201ENST00000416175 326 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 BX510359.2-201ENST00000417920 305 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 PSMA2P3-201ENST00000429685 675 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 RPS26P56-201ENST00000444468 240 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 RNU6-897P-201ENST00000517135 105 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AP003733.2-201ENST00000529409 171 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 RN7SL690P-201ENST00000582087 240 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC008162.1-201ENST00000604718 254 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AL670379.4-201ENST00000605279 254 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 AL590099.1-201ENST00000615276 138 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC130454.1-201ENST00000622948 401 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC068724.3-201ENST00000625906 87 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF43Q68DV7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 SAMMSON-213ENST00000641336 1521 ntBASIC5.01□□□□□ -1.61
RNF43Q68DV7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF43Q68DV7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF43Q68DV7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF43Q68DV7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5□□□□□ -1.61
RNF43Q68DV7 AC108751.5-201ENST00000492880 1336 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5□□□□□ -1.61
RNF43Q68DV7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5□□□□□ -1.61
RNF43Q68DV7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF43Q68DV7 AC010300.1-201ENST00000600671 5134 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RNU6-125P-201ENST00000384505 107 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 SAR1AP2-201ENST00000392696 594 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 MIR548H3-201ENST00000408771 118 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RNU6-1156P-201ENST00000410365 100 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5□□□□□ -1.61
RNF43Q68DV7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 AC004975.1-201ENST00000428733 208 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 FCF1P4-201ENST00000448326 183 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 OR2AQ1P-201ENST00000451972 200 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RPS5P7-201ENST00000456664 608 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AC010326.1-201ENST00000462726 602 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RPL21P6-201ENST00000479171 504 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RNU2-69P-201ENST00000516061 100 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RNU5B-3P-201ENST00000516601 115 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 Y_RNA.719-201ENST00000517156 106 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 AC006600.1-201ENST00000572529 153 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms