Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN1BQ07699 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCN1BQ07699 MTND5P7-201ENST00000413558 1798 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCN1BQ07699 OR1S2-201ENST00000302592 978 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 FRG1CP-201ENST00000358464 769 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 SNORD9-201ENST00000362566 104 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.97□□□□□ -1.93
SCN1BQ07699 RNA5SP44-201ENST00000410446 133 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 RN7SKP220-201ENST00000410611 288 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 RNU2-62P-201ENST00000410868 191 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 RNU6-920P-201ENST00000410926 92 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.97□□□□□ -1.93
SCN1BQ07699 DBIP2-201ENST00000419076 262 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 MTND4P20-201ENST00000424125 869 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 RPS15AP5-201ENST00000436276 388 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN1BQ07699 RPS15AP27-201ENST00000449183 343 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN1BQ07699 RPL30P6-201ENST00000475925 342 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC068587.1-201ENST00000483613 781 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN1BQ07699 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN1BQ07699 AC105252.1-201ENST00000503089 286 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 SNORA31.3-201ENST00000516029 96 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC007991.1-201ENST00000522680 631 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN1BQ07699 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN1BQ07699 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN1BQ07699 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN1BQ07699 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN1BQ07699 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.97□□□□□ -1.93
SCN1BQ07699 AC067852.3-201ENST00000589177 561 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.97□□□□□ -1.93
SCN1BQ07699 AL360219.1-201ENST00000610230 366 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN1BQ07699 CR392039.5-201ENST00000623201 510 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC091953.2-201ENST00000623979 160 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AC127502.3-201ENST00000636170 1206 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCN1BQ07699 AC032011.1-201ENST00000611703 1549 ntBASIC2.97□□□□□ -1.93
SCN1BQ07699 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN1BQ07699 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SCN1BQ07699 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN1BQ07699 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN1BQ07699 U8.11-201ENST00000384699 133 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 U8.12-201ENST00000384701 133 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 SNORA46-201ENST00000384762 135 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN1BQ07699 RNU2-36P-201ENST00000410361 191 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 ZNF90P2-204ENST00000419323 1075 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 RPS15AP12-201ENST00000419498 388 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN1BQ07699 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCN1BQ07699 GPM6BP2-201ENST00000432046 144 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 RPL36AP53-201ENST00000432891 316 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 NEFMP1-201ENST00000443423 1006 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 UBBP3-201ENST00000445497 241 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 Z96811.1-201ENST00000445880 108 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN1BQ07699 GPM6BP1-201ENST00000446387 144 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 Z99127.3-201ENST00000448158 395 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN1BQ07699 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN1BQ07699 U8.18-201ENST00000459285 133 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 RPL27AP5-201ENST00000469428 449 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AP000797.1-201ENST00000478870 387 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN1BQ07699 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN1BQ07699 RN7SKP21-201ENST00000516503 220 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 PAICSP4-201ENST00000517543 1253 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 SUB1P1-201ENST00000524415 382 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN1BQ07699 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN1BQ07699 H3F3AP1-201ENST00000559984 334 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN1BQ07699 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN1BQ07699 AC005498.1-201ENST00000592125 465 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AC119501.1-201ENST00000603646 475 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AC027807.2-201ENST00000616099 408 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AC091304.6-201ENST00000619761 202 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AL589994.2-201ENST00000621124 579 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 AF246928.1-201ENST00000623768 87 ntBASIC2.96□□□□□ -1.94
SCN1BQ07699 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN1BQ07699 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN1BQ07699 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN1BQ07699 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN1BQ07699 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN1BQ07699 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.95□□□□□ -1.94
SCN1BQ07699 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN1BQ07699 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN1BQ07699 Z83843.1-201ENST00000604070 3685 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCN1BQ07699 ZNF519P1-201ENST00000449011 1626 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms