Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TPMTP1-201ENST00000592307 737 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AL606834.2-201ENST00000602954 668 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AL022154.1-201ENST00000604698 785 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.95□□□□□ -1.94
SHC1P29353 AP002360.4-201ENST00000606980 481 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC092954.2-201ENST00000609103 430 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC107294.3-201ENST00000609211 526 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC109347.2-201ENST00000610220 349 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC091304.9-201ENST00000612091 226 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AL355073.2-201ENST00000612106 557 ntBASIC2.95□□□□□ -1.94
SHC1P29353 uc_338.1-201ENST00000612113 180 ntBASIC2.95□□□□□ -1.94
SHC1P29353 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SHC1P29353 MIR7112-201ENST00000616126 65 ntBASIC2.95□□□□□ -1.94
SHC1P29353 SNORD39.4-201ENST00000620099 78 ntBASIC2.95□□□□□ -1.94
SHC1P29353 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.95□□□□□ -1.94
SHC1P29353 AC004009.2-201ENST00000623016 728 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC068880.5-201ENST00000624331 290 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC124864.2-201ENST00000624736 186 ntBASIC2.95□□□□□ -1.94
SHC1P29353 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.95□□□□□ -1.94
SHC1P29353 AC138915.3-201ENST00000562908 1389 ntBASIC2.95□□□□□ -1.94
SHC1P29353 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHC1P29353 AC091152.2-201ENST00000591628 2569 ntBASIC2.95□□□□□ -1.94
SHC1P29353 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SHC1P29353 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SHC1P29353 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.94□□□□□ -1.94
SHC1P29353 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 Y_RNA.46-201ENST00000362695 102 ntBASIC2.94□□□□□ -1.94
SHC1P29353 RNA5SP56-201ENST00000410277 118 ntBASIC2.94□□□□□ -1.94
SHC1P29353 RNA5SP120-201ENST00000410900 112 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC022028.1-201ENST00000412054 408 ntBASIC2.94□□□□□ -1.94
SHC1P29353 C1DP2-201ENST00000418167 426 ntBASIC2.94□□□□□ -1.94
SHC1P29353 TOMM22P1-201ENST00000418578 312 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AL158156.1-201ENST00000422509 473 ntBASIC2.94□□□□□ -1.94
SHC1P29353 USP9YP36-201ENST00000424581 829 ntBASIC2.94□□□□□ -1.94
SHC1P29353 RPL23AP69-201ENST00000431134 458 ntBASIC2.94□□□□□ -1.94
SHC1P29353 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 AC009969.1-201ENST00000438726 172 ntBASIC2.94□□□□□ -1.94
SHC1P29353 RPL17P49-201ENST00000443728 411 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 BX510359.1-201ENST00000456973 237 ntBASIC2.94□□□□□ -1.94
SHC1P29353 RPS3AP17-201ENST00000472594 777 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SHC1P29353 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 AC006390.1-201ENST00000508068 283 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC010265.1-201ENST00000513509 211 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.94□□□□□ -1.94
SHC1P29353 AC093677.1-201ENST00000514414 678 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 AP003467.2-201ENST00000520175 319 ntBASIC2.94□□□□□ -1.94
SHC1P29353 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.94□□□□□ -1.94
SHC1P29353 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.94□□□□□ -1.94
SHC1P29353 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.94□□□□□ -1.94
SHC1P29353 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.94□□□□□ -1.94
SHC1P29353 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 AL669831.4-202ENST00000590817 238 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.94□□□□□ -1.94
SHC1P29353 CKS1BP3-201ENST00000600888 237 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AL159169.3-201ENST00000608871 561 ntBASIC2.94□□□□□ -1.94
SHC1P29353 U4.5-201ENST00000617137 123 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AL158209.2-201ENST00000619266 216 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC136475.10-201ENST00000620253 385 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC009318.4-201ENST00000620496 486 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AL157786.1-207ENST00000627771 695 ntBASIC2.94□□□□□ -1.94
SHC1P29353 SNORA50A-202ENST00000629536 136 ntBASIC2.94□□□□□ -1.94
SHC1P29353 AC110994.2-201ENST00000635481 492 ntBASIC2.94□□□□□ -1.94
SHC1P29353 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SHC1P29353 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHC1P29353 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHC1P29353 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHC1P29353 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.93□□□□□ -1.94
SHC1P29353 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHC1P29353 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.93□□□□□ -1.94
SHC1P29353 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHC1P29353 U3.6-201ENST00000363622 211 ntBASIC2.93□□□□□ -1.94
SHC1P29353 SNORA70.4-201ENST00000365509 134 ntBASIC2.93□□□□□ -1.94
SHC1P29353 RNU6-1181P-201ENST00000384191 106 ntBASIC2.93□□□□□ -1.94
SHC1P29353 Y_RNA.548-201ENST00000384656 105 ntBASIC2.93□□□□□ -1.94
SHC1P29353 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
SHC1P29353 BTF3P7-201ENST00000407097 488 ntBASIC2.93□□□□□ -1.94
SHC1P29353 RNU2-71P-201ENST00000411395 189 ntBASIC2.93□□□□□ -1.94
SHC1P29353 AC078974.1-201ENST00000411597 223 ntBASIC2.93□□□□□ -1.94
SHC1P29353 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.93□□□□□ -1.94
SHC1P29353 AC012065.2-201ENST00000421295 375 ntBASIC2.93□□□□□ -1.94
SHC1P29353 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.93□□□□□ -1.94
SHC1P29353 VDAC1P3-201ENST00000434069 851 ntBASIC2.93□□□□□ -1.94
SHC1P29353 CST9LP2-201ENST00000437612 320 ntBASIC2.93□□□□□ -1.94
SHC1P29353 AC073614.1-201ENST00000438690 650 ntBASIC2.93□□□□□ -1.94
SHC1P29353 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHC1P29353 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHC1P29353 FGF7P6-202ENST00000451282 293 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms