Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC174048.1-201ENST00000603389 144 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 ELOCP5-201ENST00000604924 333 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 HMGN2P28-201ENST00000606102 262 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC002044.1-201ENST00000606707 158 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL355810.1-201ENST00000614629 552 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL136164.3-201ENST00000624429 3978 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC010615.1-201ENST00000594254 1764 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC138393.1-203ENST00000327086 343 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.483-201ENST00000384380 101 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 MIR517A-201ENST00000385001 87 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AL590762.2-201ENST00000395798 571 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 RNA5SP113-201ENST00000410486 84 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC092447.6-201ENST00000414578 210 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 FTH1P25-201ENST00000447665 469 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC079168.2-201ENST00000453977 416 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC234775.1-201ENST00000454247 670 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 RNA5SP228-201ENST00000516232 133 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 RN7SKP277-201ENST00000516895 283 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AL390726.5-202ENST00000564800 256 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 MIR3128-201ENST00000581957 66 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 MIR5188-201ENST00000583467 113 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AL031176.1-201ENST00000604554 466 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 MIR6130-201ENST00000619419 109 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 AC008669.1-201ENST00000565823 2178 ntBASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.92□□□□□ -1.62
AP4E1Q9UPM8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.222-201ENST00000364264 102 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU6-1303P-201ENST00000364841 107 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 SNORD14.1-201ENST00000365609 90 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU6-14P-201ENST00000384630 106 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.562-201ENST00000384695 113 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU6-821P-201ENST00000390995 107 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AL080315.1-201ENST00000406055 466 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU2-38P-201ENST00000410856 79 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AC108032.1-201ENST00000416706 207 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RPL12P3-201ENST00000440080 396 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU7-138P-201ENST00000459479 64 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AP000942.1-201ENST00000463969 747 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RNU6-1023P-201ENST00000516137 106 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 SNORA40.14-201ENST00000516543 86 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 CDH12P4-201ENST00000517835 295 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 CDH12P3-201ENST00000517935 295 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 CDH12P1-201ENST00000518435 295 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 MIR3934-201ENST00000579806 107 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 MIR4436B2-201ENST00000581415 91 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AC233702.9-201ENST00000581528 203 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 MIR4436B1-201ENST00000583272 91 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AC012119.1-201ENST00000603184 222 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AL034351.1-201ENST00000605288 668 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP4E1Q9UPM8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 AL451142.2-201ENST00000429076 2090 ntBASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms