Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.79□□□□□ -1.8
EBF3Q9H4W6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.79□□□□□ -1.8
EBF3Q9H4W6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.79□□□□□ -1.8
EBF3Q9H4W6 CKS1BP3-201ENST00000600888 237 ntBASIC3.79□□□□□ -1.8
EBF3Q9H4W6 YWHAQP7-201ENST00000603536 658 ntBASIC3.79□□□□□ -1.8
EBF3Q9H4W6 RPL23AP92-201ENST00000603609 255 ntBASIC3.79□□□□□ -1.8
EBF3Q9H4W6 AL136363.1-201ENST00000605349 337 ntBASIC3.79□□□□□ -1.8
EBF3Q9H4W6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.79□□□□□ -1.8
EBF3Q9H4W6 AC090229.1-201ENST00000590983 1609 ntBASIC3.79□□□□□ -1.8
EBF3Q9H4W6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EBF3Q9H4W6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.79□□□□□ -1.8
EBF3Q9H4W6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 ELL2P4-201ENST00000446870 1376 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 GNG5P1-201ENST00000255500 204 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RNU6-845P-201ENST00000362578 103 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RNY3P3-201ENST00000363816 102 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC068050.1-201ENST00000394891 380 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RPS20P2-201ENST00000402520 389 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AL356432.1-201ENST00000405809 419 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MIR1302-11-201ENST00000408051 138 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MIR1302-9-201ENST00000408365 138 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MIR1302-10-201ENST00000408734 138 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC069218.2-201ENST00000411665 344 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RPS29P31-201ENST00000446147 164 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MTND4P19-201ENST00000446659 478 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 SNRPGP6-201ENST00000451124 220 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MTND1P12-201ENST00000455231 147 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC104563.1-201ENST00000476147 376 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 HMGB1P21-201ENST00000502313 581 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC034159.1-201ENST00000513885 583 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RN7SKP83-201ENST00000516512 178 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RNU6-1003P-201ENST00000517099 105 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 IGKV2-23-201ENST00000518729 323 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC022861.1-201ENST00000522981 663 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AP003034.1-201ENST00000534621 422 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC078814.3-201ENST00000553036 491 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC012507.3-201ENST00000603556 477 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC245014.2-201ENST00000603689 287 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC246785.4-201ENST00000605374 287 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AL162730.1-201ENST00000605734 292 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MIR1302-2-201ENST00000607096 138 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.812-201ENST00000610788 101 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.784-201ENST00000613803 101 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 uc_338.32-201ENST00000615087 172 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.787-201ENST00000616522 101 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.780-201ENST00000617336 101 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.801-201ENST00000619005 101 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AC005858.4-201ENST00000623191 700 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 MAPK10-373ENST00000641983 6772 ntBASIC3.78□□□□□ -1.8
EBF3Q9H4W6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
EBF3Q9H4W6 AL645937.1-201ENST00000641739 1652 ntBASIC3.78□□□□□ -1.81
EBF3Q9H4W6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
EBF3Q9H4W6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.132-201ENST00000363421 102 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.138-201ENST00000363462 102 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 RNU6-767P-201ENST00000384132 107 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.548-201ENST00000384656 105 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL031679.1-201ENST00000400616 525 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 SSXP10-201ENST00000402595 565 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL590004.1-201ENST00000405321 300 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 OR9R1P-201ENST00000412200 877 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 RPS7P15-201ENST00000415804 584 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 SNRPEP10-201ENST00000420249 274 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 MTCO2P5-201ENST00000422621 426 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC133104.1-201ENST00000429100 218 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 CYCSP4-201ENST00000429682 331 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC005534.2-201ENST00000431047 433 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms