Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 RNU6-888P-201ENST00000363010 101 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 AC099782.1-201ENST00000425889 474 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 MIR5197-201ENST00000583721 112 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 MIR203B-201ENST00000636080 86 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 MIR376A2-201ENST00000636782 80 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SENP3Q9H4L4 AC004014.2-201ENST00000623718 5122 ntBASIC9.6□□□□□ -0.87
SENP3Q9H4L4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 AC008163.1-202ENST00000636004 2889 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RNU6-1305P-201ENST00000364353 104 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RNU6-1280P-201ENST00000365211 107 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RNU6-524P-201ENST00000384270 107 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RN7SKP16-201ENST00000410180 299 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RNA5SP511-201ENST00000410487 115 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RN7SKP286-201ENST00000410894 299 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RN7SL738P-201ENST00000470264 297 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 AIG1P1-201ENST00000503376 148 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 RNU2-44P-201ENST00000516795 194 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 MIR6748-201ENST00000610433 71 ntBASIC9.59□□□□□ -0.87
SENP3Q9H4L4 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
SENP3Q9H4L4 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RNA5SP443-201ENST00000363083 132 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 Y_RNA.430-201ENST00000384081 110 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RNU6-1201P-201ENST00000384227 107 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 SNORA51.8-201ENST00000384234 132 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 MIR181A2-201ENST00000384863 110 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RNU6-871P-201ENST00000516122 100 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RNA5SP287-201ENST00000516358 103 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RNU1-103P-201ENST00000516502 125 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RN7SKP35-201ENST00000517210 151 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 AL121603.1-201ENST00000553815 142 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 MIR4675-201ENST00000577898 77 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 RN7SL404P-201ENST00000582421 281 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 AC012468.1-201ENST00000604888 430 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 AC126915.2-201ENST00000610957 190 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 PCGEM1.1-201ENST00000613431 131 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 AC087741.2-201ENST00000619415 172 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC9.58□□□□□ -0.88
SENP3Q9H4L4 COL6A4P1-202ENST00000487147 4317 ntBASIC9.58□□□□□ -0.88
SENP3Q9H4L4 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 RNU4-67P-201ENST00000364569 141 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 RN7SL254P-201ENST00000460609 284 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 RN7SL271P-201ENST00000487601 295 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC9.57□□□□□ -0.88
SENP3Q9H4L4 HSPE1P7-201ENST00000604681 321 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 U1.25-201ENST00000614085 162 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 MIR6134-201ENST00000617606 109 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 MIR6730-201ENST00000622213 67 ntBASIC9.57□□□□□ -0.88
SENP3Q9H4L4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms