Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP3Q9BWW4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP3Q9BWW4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP3Q9BWW4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP3Q9BWW4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP3Q9BWW4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
SSBP3Q9BWW4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC108751.5-201ENST00000492880 1336 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RN7SKP115-201ENST00000363177 317 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 UBBP2-201ENST00000376781 231 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RNU6-842P-201ENST00000384269 107 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 Y_RNA.551-201ENST00000384661 102 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RNU6-1093P-201ENST00000391194 107 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 MIR298-201ENST00000401212 88 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC108032.1-201ENST00000416706 207 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 BX510359.2-201ENST00000417920 305 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL137014.1-201ENST00000420490 1226 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL590135.1-201ENST00000422215 156 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RPL7P2-201ENST00000427639 268 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 PSMA2P3-201ENST00000429685 675 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL591704.1-201ENST00000432574 275 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RPS5P7-201ENST00000456664 608 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RN7SL517P-201ENST00000462240 305 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 FTH1P2-201ENST00000466086 412 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 MED28P2-201ENST00000475771 317 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RPL21P103-201ENST00000479921 488 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 FTH1P24-201ENST00000503502 462 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC083829.1-201ENST00000503756 657 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 HMGB3P16-201ENST00000508037 287 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 SNORA25.11-201ENST00000515935 105 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 Y_RNA.673-201ENST00000516306 88 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC063949.1-201ENST00000552900 865 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL049839.1-201ENST00000556151 657 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC109446.1-201ENST00000566172 220 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 RN7SL435P-201ENST00000584418 282 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AL121932.1-201ENST00000605542 214 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC009951.1-201ENST00000623674 2614 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 AC008669.1-201ENST00000565823 2178 ntBASIC4.02□□□□□ -1.77
SSBP3Q9BWW4 MAPK10-286ENST00000641208 8747 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC005332.5-201ENST00000591222 2919 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 SNORD51-201ENST00000384320 80 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 Y_RNA.577-201ENST00000384794 101 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 MIR517A-201ENST00000385001 87 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 RNU11-4P-201ENST00000391149 133 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 U3.29-201ENST00000391296 212 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AL139039.1-201ENST00000401900 692 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 RNU4-65P-201ENST00000410473 140 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 ELOCP20-201ENST00000422460 345 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AL031274.1-201ENST00000450334 232 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC243772.1-201ENST00000451620 410 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC073073.1-201ENST00000493920 463 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 RNU6-27P-201ENST00000516146 107 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC133555.2-201ENST00000550213 292 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC022726.1-201ENST00000587475 207 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 HMGB2P1-201ENST00000591146 634 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 AC174048.1-201ENST00000603389 144 ntBASIC4.01□□□□□ -1.77
SSBP3Q9BWW4 BX005214.3-202ENST00000619809 325 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms