Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MIR1305-201ENST00000408300 86 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AL445669.1-201ENST00000426743 755 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 RSU1P2-202ENST00000437884 485 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC004866.2-201ENST00000438285 481 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC234775.1-201ENST00000454247 670 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 MIR3915-201ENST00000578518 97 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 BDH2P1-201ENST00000602288 736 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 WISP1-OT1-201ENST00000602893 642 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC013444.2-201ENST00000603317 787 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC093732.2-201ENST00000607950 274 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC095031.1-201ENST00000623685 672 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 AC006927.3-201ENST00000638789 384 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NEK1Q96PY6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEK1Q96PY6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NEK1Q96PY6 API5P2-201ENST00000397055 1498 ntBASIC3.53□□□□□ -1.84
NEK1Q96PY6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NEK1Q96PY6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEK1Q96PY6 RNU5F-7P-201ENST00000363696 115 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 SNORA5B-201ENST00000363786 132 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 SSXP9-201ENST00000417503 292 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC012498.1-201ENST00000424037 437 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 MTCO1P39-201ENST00000426148 480 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 LARP1BP3-201ENST00000437229 869 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC025750.2-201ENST00000442609 450 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC112653.1-201ENST00000443851 386 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 RPL21P41-201ENST00000459863 264 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 MTND3P7-201ENST00000474435 343 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC021382.1-201ENST00000483523 359 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC034222.1-201ENST00000494052 532 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC010486.3-201ENST00000511602 785 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 RN7SKP282-201ENST00000516824 299 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 PCMTD1P2-201ENST00000565017 355 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 AP001330.4-201ENST00000604350 154 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AL022099.1-201ENST00000604551 712 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC107294.1-201ENST00000609524 467 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 AC002550.2-201ENST00000621246 394 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.52□□□□□ -1.85
NEK1Q96PY6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.52□□□□□ -1.85
NEK1Q96PY6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEK1Q96PY6 AL355596.1-201ENST00000565399 3996 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEK1Q96PY6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NEK1Q96PY6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 U8.14-201ENST00000390843 143 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 TPMTP3-201ENST00000411928 735 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AC009518.2-201ENST00000418056 731 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 THAP5P1-201ENST00000439089 262 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 RAC1P7-201ENST00000445367 377 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 RNU6-528P-201ENST00000516926 100 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AC009812.2-201ENST00000517657 457 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AC103783.1-201ENST00000520506 373 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AP002404.1-201ENST00000532005 451 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 ROCK1P1-201ENST00000573767 549 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.51□□□□□ -1.85
NEK1Q96PY6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 AL353748.2-201ENST00000622148 471 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 CU459211.1-201ENST00000635667 749 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEK1Q96PY6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEK1Q96PY6 AL445523.1-201ENST00000451184 1362 ntBASIC3.51□□□□□ -1.85
NEK1Q96PY6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NEK1Q96PY6 AL513185.3-201ENST00000433335 1300 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.5□□□□□ -1.85
NEK1Q96PY6 RNU6-501P-201ENST00000364072 100 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 RNU6-359P-201ENST00000365466 108 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 RNU6-769P-201ENST00000384407 104 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 SNORA44-201ENST00000384584 132 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 U3.42-201ENST00000408746 214 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 YPEL5P1-201ENST00000419731 367 ntBASIC3.5□□□□□ -1.85
NEK1Q96PY6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms