Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC103843.2-201ENST00000530523 682 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC128657.1-201ENST00000549459 145 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC008536.2-201ENST00000607284 349 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC004067.1-201ENST00000608733 700 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC099654.14-201ENST00000638599 341 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS50Q96JG6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS50Q96JG6 RLIMP1-201ENST00000339626 1680 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS50Q96JG6 Y_RNA.367-201ENST00000365544 101 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AL109755.1-201ENST00000401791 649 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 RPS3AP24-201ENST00000407896 734 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 RNU6-908P-201ENST00000410160 94 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 HSPE1P12-201ENST00000412576 301 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC093106.2-201ENST00000428212 385 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 RPL35AP22-201ENST00000436855 335 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 HMGB3P8-201ENST00000449709 577 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC140076.1-201ENST00000449897 361 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 VN1R17P-201ENST00000472048 1090 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 RPS29P25-201ENST00000481709 171 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 RPL36AP51-201ENST00000487216 318 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 HSPD1P15-201ENST00000505573 1122 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC074344.1-201ENST00000512823 224 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC106785.1-201ENST00000565935 262 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 RPL23AP87-202ENST00000573039 466 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 TUG1_2.1-201ENST00000614234 87 ntBASIC3.85□□□□□ -1.79
VPS50Q96JG6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS50Q96JG6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS50Q96JG6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS50Q96JG6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS50Q96JG6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNU6-188P-201ENST00000364207 107 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNU6-1322P-201ENST00000364309 107 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNA5SP283-201ENST00000365604 119 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 Y_RNA.481-201ENST00000384373 102 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 MIR554-201ENST00000384874 96 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 MIR558-201ENST00000384920 94 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNU2-43P-201ENST00000410306 190 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNU4-65P-201ENST00000410473 140 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 MRPL50P2-201ENST00000416821 482 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 MTATP6P16-201ENST00000434543 526 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RPS20P5-201ENST00000434808 360 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC090774.1-201ENST00000435925 246 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC004866.2-201ENST00000438285 481 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC083863.1-201ENST00000438811 231 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC079781.2-201ENST00000446424 169 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 CACYBPP2-201ENST00000453625 678 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC004801.2-202ENST00000463559 283 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC233702.1-201ENST00000482905 502 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RPL23AP55-201ENST00000498163 452 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC026427.2-201ENST00000506228 536 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC026726.1-201ENST00000512859 601 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC026801.2-201ENST00000515352 425 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RNU6-835P-201ENST00000516974 104 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AP004371.1-201ENST00000525240 214 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC011979.2-201ENST00000527568 352 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 OR4R1P-201ENST00000529879 463 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC091516.1-201ENST00000549191 703 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 RPL21P12-201ENST00000559810 515 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC025627.2-201ENST00000576220 160 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms