Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 RPL10P17-201ENST00000453852 316 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AL136097.1-201ENST00000456945 913 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 RNU7-120P-201ENST00000459334 63 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 RPS23P5-201ENST00000495419 428 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AC008958.1-201ENST00000511047 682 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 CBX3P4-201ENST00000538909 354 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AC093023.1-201ENST00000547375 507 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AC025884.1-201ENST00000556034 378 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AL158827.2-201ENST00000602494 330 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 BX005214.3-202ENST00000619809 325 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AL691447.3-201ENST00000635020 330 ntBASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.8□□□□□ -1.48
SH3RF1Q7Z6J0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AP000756.2-201ENST00000624168 2567 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 Y_RNA.27-201ENST00000362540 103 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 RNU6-1290P-201ENST00000362957 109 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 RNU4-44P-201ENST00000363050 141 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 Y_RNA.199-201ENST00000364014 102 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AL080315.1-201ENST00000406055 466 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 MIR1182-201ENST00000408363 97 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 RNU2-20P-201ENST00000410425 191 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AL159987.2-201ENST00000432754 307 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 OR4C10P-201ENST00000434991 931 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 BTF3P6-201ENST00000448054 499 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 RNU6-1338P-201ENST00000516328 91 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 IGKV2D-36-201ENST00000518643 226 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AP001284.1-201ENST00000528393 2118 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 TRAV32-201ENST00000553993 340 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AC006349.1-201ENST00000555526 235 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 LRRC37A5P-203ENST00000580181 585 ntBASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SH3RF1Q7Z6J0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 RNA5SP428-201ENST00000365129 132 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 U8.8-201ENST00000365399 135 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC112498.1-201ENST00000444401 332 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 BX276092.4-201ENST00000452056 248 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 RPL7P49-201ENST00000471402 708 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC140172.1-201ENST00000502928 141 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 SERF1AP1-201ENST00000514575 187 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 RN7SL652P-201ENST00000577769 300 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 MIR548AC-201ENST00000585049 88 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AL121917.1-203ENST00000605534 577 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC073657.2-201ENST00000605661 303 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC116447.1-201ENST00000613153 453 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC243829.7-201ENST00000633081 225 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AP000560.1-201ENST00000624150 1937 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 AC100778.3-201ENST00000580060 1750 ntBASIC5.78□□□□□ -1.48
SH3RF1Q7Z6J0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
SH3RF1Q7Z6J0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
SH3RF1Q7Z6J0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 snoU2_19.2-201ENST00000363024 80 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 Y_RNA.170-201ENST00000363746 110 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 U3.13-201ENST00000364804 214 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-708P-201ENST00000384217 107 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 SNORD115-46-201ENST00000390982 71 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 U3.42-201ENST00000408746 214 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RNU2-51P-201ENST00000410708 197 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms