Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU6-1158P-201ENST00000391167 107 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 RAB28P1-201ENST00000411517 641 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC092809.3-201ENST00000415453 231 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 TMSB10P2-201ENST00000416049 131 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC092017.2-201ENST00000427600 362 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 HMGB1P27-201ENST00000431429 603 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 ATP5HP2-201ENST00000433885 485 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 RPL36AP6-201ENST00000435770 321 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 FDX1P2-201ENST00000450769 375 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC069499.1-201ENST00000489433 509 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC079382.1-201ENST00000493346 557 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC116562.3-201ENST00000506136 177 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-928P-201ENST00000516876 104 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 RNA5SP471-201ENST00000516971 106 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC068587.5-201ENST00000528506 175 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AP000867.2-201ENST00000532468 320 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AL109766.1-201ENST00000555080 552 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC104763.2-201ENST00000604179 382 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AL161798.1-201ENST00000604630 131 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AP001596.2-201ENST00000608410 312 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC005609.4-201ENST00000625071 447 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 SEPT14P19-203ENST00000633205 211 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 MIR454-201ENST00000390180 115 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 UBE2V1P2-201ENST00000397758 440 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 Z98941.1-201ENST00000407764 100 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 RPL18P10-201ENST00000425606 538 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 ZNF863P-201ENST00000426746 417 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 ELOCP14-201ENST00000428070 331 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 USP9YP28-201ENST00000435142 589 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 ELOCP7-201ENST00000439968 331 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 RPS24P13-201ENST00000442520 397 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 RPS4XP4-201ENST00000443195 763 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 RPL23AP20-201ENST00000447965 421 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 Z99127.3-201ENST00000448158 395 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC117522.1-201ENST00000509821 380 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 APOOP4-201ENST00000513530 597 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 RN7SKP60-201ENST00000516985 239 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 RNA5SP290-201ENST00000517133 127 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 IGKV2-38-201ENST00000517443 247 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC104383.1-201ENST00000530297 370 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 OR5BN1P-201ENST00000532955 829 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 NCAPGP2-201ENST00000557911 754 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 HMGB1P33-201ENST00000563485 527 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 MIR5096-201ENST00000583713 70 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC174048.1-201ENST00000603389 144 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 MIR486-1-201ENST00000612171 68 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AP001486.3-201ENST00000615334 372 ntBASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PPP4R4Q6NUP7 AC010680.1-201ENST00000590024 3590 ntBASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 UBE2L2-201ENST00000254302 429 ntBASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 RNU4-48P-201ENST00000365559 182 ntBASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-140P-201ENST00000384566 108 ntBASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-606P-201ENST00000384721 111 ntBASIC3.99□□□□□ -1.77
PPP4R4Q6NUP7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 364.7 ms