Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.64□□□□□ -1.67
MRE11P49959 MFSD8-242ENST00000641690 4199 ntBASIC4.64□□□□□ -1.67
MRE11P49959 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.64□□□□□ -1.67
MRE11P49959 RPL7P26-201ENST00000333817 754 ntBASIC4.64□□□□□ -1.67
MRE11P49959 SNORA63-201ENST00000363450 132 ntBASIC4.64□□□□□ -1.67
MRE11P49959 Y_RNA.234-201ENST00000364409 97 ntBASIC4.64□□□□□ -1.67
MRE11P49959 SNORA51.2-201ENST00000364595 132 ntBASIC4.64□□□□□ -1.67
MRE11P49959 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MRE11P49959 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 RNU6-1227P-201ENST00000383981 107 ntBASIC4.64□□□□□ -1.67
MRE11P49959 RNU6-1207P-201ENST00000384343 107 ntBASIC4.64□□□□□ -1.67
MRE11P49959 RPL7P60-201ENST00000397636 735 ntBASIC4.64□□□□□ -1.67
MRE11P49959 MIR1302-11-201ENST00000408051 138 ntBASIC4.64□□□□□ -1.67
MRE11P49959 MIR1302-9-201ENST00000408365 138 ntBASIC4.64□□□□□ -1.67
MRE11P49959 MIR1302-10-201ENST00000408734 138 ntBASIC4.64□□□□□ -1.67
MRE11P49959 RNA5SP239-201ENST00000410218 129 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.64□□□□□ -1.67
MRE11P49959 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.64□□□□□ -1.67
MRE11P49959 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.64□□□□□ -1.67
MRE11P49959 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 CACYBPP2-201ENST00000453625 678 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC007967.1-201ENST00000455422 1159 ntBASIC4.64□□□□□ -1.67
MRE11P49959 RPL36AP13-201ENST00000457490 317 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC233702.1-201ENST00000482905 502 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.64□□□□□ -1.67
MRE11P49959 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.64□□□□□ -1.67
MRE11P49959 AC105029.1-201ENST00000520250 669 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 OR4T1P-201ENST00000554933 911 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 MTCO3P13-201ENST00000577757 781 ntBASIC4.64□□□□□ -1.67
MRE11P49959 MIR3146-201ENST00000580367 79 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.64□□□□□ -1.67
MRE11P49959 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.64□□□□□ -1.67
MRE11P49959 UBE2L4-201ENST00000587688 464 ntBASIC4.64□□□□□ -1.67
MRE11P49959 MIR1302-2-201ENST00000607096 138 ntBASIC4.64□□□□□ -1.67
MRE11P49959 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.64□□□□□ -1.67
MRE11P49959 AC009318.4-201ENST00000620496 486 ntBASIC4.64□□□□□ -1.67
MRE11P49959 MIR6852-201ENST00000621699 66 ntBASIC4.64□□□□□ -1.67
MRE11P49959 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
MRE11P49959 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
MRE11P49959 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
MRE11P49959 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.63□□□□□ -1.67
MRE11P49959 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MRE11P49959 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MRE11P49959 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.63□□□□□ -1.67
MRE11P49959 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MRE11P49959 SNORA73.2-201ENST00000364946 201 ntBASIC4.63□□□□□ -1.67
MRE11P49959 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.63□□□□□ -1.67
MRE11P49959 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MRE11P49959 RNU6-74P-201ENST00000384235 107 ntBASIC4.63□□□□□ -1.67
MRE11P49959 MIR124-3-201ENST00000384866 87 ntBASIC4.63□□□□□ -1.67
MRE11P49959 MIR1-2-201ENST00000384961 85 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AL162578.1-201ENST00000406202 378 ntBASIC4.63□□□□□ -1.67
MRE11P49959 HSPE1P8-201ENST00000406997 288 ntBASIC4.63□□□□□ -1.67
MRE11P49959 TMSB10P2-201ENST00000416049 131 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.63□□□□□ -1.67
MRE11P49959 USP9YP20-201ENST00000419224 558 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AF228730.4-201ENST00000421457 183 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AL365400.1-201ENST00000431854 640 ntBASIC4.63□□□□□ -1.67
MRE11P49959 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.63□□□□□ -1.67
MRE11P49959 AC004801.2-202ENST00000463559 283 ntBASIC4.63□□□□□ -1.67
MRE11P49959 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.63□□□□□ -1.67
MRE11P49959 RN7SL271P-201ENST00000487601 295 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AC055855.1-201ENST00000489563 579 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.63□□□□□ -1.67
MRE11P49959 SCARNA24.1-201ENST00000516465 137 ntBASIC4.63□□□□□ -1.67
MRE11P49959 RNU7-143P-201ENST00000516781 65 ntBASIC4.63□□□□□ -1.67
MRE11P49959 SNORD60.2-201ENST00000516883 86 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.63□□□□□ -1.67
MRE11P49959 AC022690.1-201ENST00000526681 550 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AP000827.1-201ENST00000527814 258 ntBASIC4.63□□□□□ -1.67
MRE11P49959 OR4R1P-201ENST00000529879 463 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AC011611.1-201ENST00000552179 197 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.63□□□□□ -1.67
MRE11P49959 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.63□□□□□ -1.67
MRE11P49959 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.63□□□□□ -1.67
MRE11P49959 AC022968.1-201ENST00000567372 442 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AC010525.2-201ENST00000590920 195 ntBASIC4.63□□□□□ -1.67
MRE11P49959 RNVU1-4-201ENST00000612985 164 ntBASIC4.63□□□□□ -1.67
MRE11P49959 MIR6864-201ENST00000617935 70 ntBASIC4.63□□□□□ -1.67
MRE11P49959 AL160413.1-201ENST00000622780 310 ntBASIC4.63□□□□□ -1.67
MRE11P49959 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
MRE11P49959 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.63□□□□□ -1.67
MRE11P49959 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
MRE11P49959 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MRE11P49959 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MRE11P49959 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.62□□□□□ -1.67
MRE11P49959 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.62□□□□□ -1.67
MRE11P49959 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 Y_RNA.58-201ENST00000362807 102 ntBASIC4.62□□□□□ -1.67
MRE11P49959 Y_RNA.154-201ENST00000363624 102 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RNY3P1-201ENST00000365085 102 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RNY3-201ENST00000365484 102 ntBASIC4.62□□□□□ -1.67
MRE11P49959 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms