Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
USH2AO75445 RNU6-288P-201ENST00000363690 104 ntBASIC0.55□□□□□ -2.32
USH2AO75445 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 RNU6-48P-201ENST00000384161 107 ntBASIC0.55□□□□□ -2.32
USH2AO75445 MIR329-1-201ENST00000385028 80 ntBASIC0.55□□□□□ -2.32
USH2AO75445 RNU2-25P-201ENST00000411041 191 ntBASIC0.55□□□□□ -2.32
USH2AO75445 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.55□□□□□ -2.32
USH2AO75445 AP001029.3-201ENST00000588063 596 ntBASIC0.55□□□□□ -2.32
USH2AO75445 MTRNR2L2-201ENST00000604882 87 ntBASIC0.55□□□□□ -2.32
USH2AO75445 AC024595.1-201ENST00000623088 387 ntBASIC0.55□□□□□ -2.32
USH2AO75445 RPS12P24-201ENST00000412619 387 ntBASIC0.55□□□□□ -2.32
USH2AO75445 PGBD4P6-201ENST00000421501 610 ntBASIC0.55□□□□□ -2.32
USH2AO75445 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC0.55□□□□□ -2.32
USH2AO75445 AC093801.2-201ENST00000503966 1050 ntBASIC0.55□□□□□ -2.32
USH2AO75445 AK3P2-201ENST00000507976 429 ntBASIC0.55□□□□□ -2.32
USH2AO75445 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC0.55□□□□□ -2.32
USH2AO75445 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC0.55□□□□□ -2.32
USH2AO75445 AP001005.3-201ENST00000622049 129 ntBASIC0.55□□□□□ -2.32
USH2AO75445 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
USH2AO75445 AL161722.3-201ENST00000605789 2983 ntBASIC0.55□□□□□ -2.32
USH2AO75445 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
USH2AO75445 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 RPL19P1-201ENST00000411635 428 ntBASIC0.55□□□□□ -2.32
USH2AO75445 RPL31P63-201ENST00000422565 375 ntBASIC0.55□□□□□ -2.32
USH2AO75445 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.55□□□□□ -2.32
USH2AO75445 SCARNA1-201ENST00000517138 166 ntBASIC0.55□□□□□ -2.32
USH2AO75445 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
USH2AO75445 AL031775.1-201ENST00000607014 887 ntBASIC0.55□□□□□ -2.32
USH2AO75445 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
USH2AO75445 AC019155.1-201ENST00000382242 574 ntBASIC0.55□□□□□ -2.32
USH2AO75445 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.55□□□□□ -2.32
USH2AO75445 AC073901.1-201ENST00000462471 408 ntBASIC0.55□□□□□ -2.32
USH2AO75445 RPS15AP34-201ENST00000487776 387 ntBASIC0.55□□□□□ -2.32
USH2AO75445 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC0.55□□□□□ -2.32
USH2AO75445 AC121161.1-201ENST00000510606 652 ntBASIC0.55□□□□□ -2.32
USH2AO75445 MIR4636-201ENST00000582271 80 ntBASIC0.55□□□□□ -2.32
USH2AO75445 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC0.55□□□□□ -2.32
USH2AO75445 CBX3P2-202ENST00000583365 535 ntBASIC0.55□□□□□ -2.32
USH2AO75445 U4.2-201ENST00000618561 85 ntBASIC0.55□□□□□ -2.32
USH2AO75445 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.55□□□□□ -2.32
USH2AO75445 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
USH2AO75445 RPS6P12-201ENST00000432491 726 ntBASIC0.54□□□□□ -2.32
USH2AO75445 SNRPGP13-201ENST00000442212 177 ntBASIC0.54□□□□□ -2.32
USH2AO75445 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.54□□□□□ -2.32
USH2AO75445 PRELID3BP4-201ENST00000515476 571 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC104986.1-201ENST00000517978 436 ntBASIC0.54□□□□□ -2.32
USH2AO75445 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.54□□□□□ -2.32
USH2AO75445 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
USH2AO75445 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.54□□□□□ -2.32
USH2AO75445 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.54□□□□□ -2.32
USH2AO75445 AL512605.2-201ENST00000592972 256 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AL159169.2-201ENST00000610061 1269 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC006001.4-201ENST00000622243 395 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC073348.1-201ENST00000623002 331 ntBASIC0.54□□□□□ -2.32
USH2AO75445 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
USH2AO75445 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
USH2AO75445 TXNP7-201ENST00000406296 293 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.54□□□□□ -2.32
USH2AO75445 JTBP1-201ENST00000441314 247 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC0.54□□□□□ -2.32
USH2AO75445 AC103833.1-201ENST00000517442 172 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.54□□□□□ -2.32
USH2AO75445 SETP2-201ENST00000553886 926 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.54□□□□□ -2.32
USH2AO75445 RFC1-217ENST00000639695 867 ntTSL 5 BASIC0.54□□□□□ -2.32
USH2AO75445 AL137003.2-201ENST00000606924 2538 ntBASIC0.54□□□□□ -2.32
USH2AO75445 SNRPEP10-201ENST00000420249 274 ntBASIC0.54□□□□□ -2.32
USH2AO75445 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC0.54□□□□□ -2.32
USH2AO75445 AC114973.1-201ENST00000429057 632 ntBASIC0.54□□□□□ -2.32
USH2AO75445 CLIC4P1-201ENST00000453177 535 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC096751.1-202ENST00000502691 1067 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC096571.1-202ENST00000506634 735 ntBASIC0.54□□□□□ -2.32
USH2AO75445 RNA5SP402-201ENST00000517148 110 ntBASIC0.54□□□□□ -2.32
USH2AO75445 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.54□□□□□ -2.32
USH2AO75445 AC093510.2-201ENST00000562820 896 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC022387.2-201ENST00000604050 448 ntBASIC0.54□□□□□ -2.32
USH2AO75445 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.54□□□□□ -2.32
USH2AO75445 AC097655.1-201ENST00000635075 318 ntBASIC0.54□□□□□ -2.32
USH2AO75445 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
USH2AO75445 RNA5SP489-201ENST00000410986 109 ntBASIC0.54□□□□□ -2.32
USH2AO75445 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC0.54□□□□□ -2.32
USH2AO75445 AC008850.1-201ENST00000427546 362 ntBASIC0.54□□□□□ -2.32
USH2AO75445 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
USH2AO75445 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
USH2AO75445 AL121917.1-203ENST00000605534 577 ntBASIC0.54□□□□□ -2.32
USH2AO75445 AC092954.1-201ENST00000609121 445 ntBASIC0.54□□□□□ -2.32
USH2AO75445 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
USH2AO75445 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
USH2AO75445 MIR936-201ENST00000401264 98 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RNA5SP193-201ENST00000410353 107 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RNA5SP25-201ENST00000410815 110 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AL031659.1-201ENST00000447075 539 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC0.53□□□□□ -2.32
USH2AO75445 RPS23P3-201ENST00000470993 430 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC0.53□□□□□ -2.32
USH2AO75445 AC090821.2-201ENST00000523552 176 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms