Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.32□□□□□ -1.88
ZIC3O60481 AL139415.2-201ENST00000431968 163 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 USP12PX-201ENST00000432383 1057 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AC000111.3-201ENST00000433478 193 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 RPL21P112-201ENST00000434403 463 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AL596276.1-201ENST00000434465 418 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 AL138799.3-201ENST00000438968 350 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.32□□□□□ -1.88
ZIC3O60481 AC022364.2-201ENST00000457963 554 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 SNORD97-201ENST00000459187 142 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 RPL31P13-201ENST00000484151 370 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 RPL21P129-201ENST00000491732 478 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AP002812.1-201ENST00000495378 474 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.32□□□□□ -1.88
ZIC3O60481 AC004062.1-201ENST00000509926 645 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.32□□□□□ -1.88
ZIC3O60481 SNORD27.1-201ENST00000516319 72 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 RNA5SP309-201ENST00000516670 106 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 RNU6-1178P-201ENST00000516674 107 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 Y_RNA.704-201ENST00000516851 102 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.32□□□□□ -1.88
ZIC3O60481 ERHP1-201ENST00000523006 310 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 SNRPGP16-201ENST00000533275 226 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.32□□□□□ -1.88
ZIC3O60481 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.32□□□□□ -1.88
ZIC3O60481 AL157687.1-201ENST00000554853 619 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AL512360.1-201ENST00000555346 234 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AC025678.1-201ENST00000567861 338 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.32□□□□□ -1.88
ZIC3O60481 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.32□□□□□ -1.88
ZIC3O60481 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.32□□□□□ -1.88
ZIC3O60481 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.32□□□□□ -1.88
ZIC3O60481 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.32□□□□□ -1.88
ZIC3O60481 AL121992.2-201ENST00000606262 256 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ZIC3O60481 AL355810.1-201ENST00000614629 552 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.32□□□□□ -1.88
ZIC3O60481 AC110801.1-201ENST00000623590 212 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 MIR1321-201ENST00000637766 79 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 ZNF680P1-201ENST00000436625 1469 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZIC3O60481 RNU6-960P-201ENST00000364056 120 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 RNU6-1090P-201ENST00000364065 94 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 RNU6-173P-201ENST00000364215 104 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 RNA5SP167-201ENST00000365461 116 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 Y_RNA.402-201ENST00000383972 102 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 Y_RNA.481-201ENST00000384373 102 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 HMGN2P8-201ENST00000391458 268 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 TXNP7-201ENST00000406296 293 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 MTATP6P16-201ENST00000434543 526 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 CYCSP43-201ENST00000438233 310 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 RPS3AP46-201ENST00000448352 682 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 FDX1P2-201ENST00000450769 375 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 snoU13.4-201ENST00000458916 104 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 AC106872.2-201ENST00000494303 480 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 NIPA2P2-201ENST00000496376 1083 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 FAM92A1P2-202ENST00000504766 877 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 VN1R104P-201ENST00000505115 1009 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 RNU6-1092P-201ENST00000516955 87 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC026403.1-201ENST00000518938 295 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.31□□□□□ -1.88
ZIC3O60481 HMGB1P6-201ENST00000569046 646 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 SNORA59B-202ENST00000578183 701 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC020914.4-201ENST00000597690 277 ntBASIC3.31□□□□□ -1.88
ZIC3O60481 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.31□□□□□ -1.88
ZIC3O60481 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.31□□□□□ -1.88
ZIC3O60481 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms