Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AL162274.2-201ENST00000614406 332 ntBASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 MIR6715A-201ENST00000615929 79 ntBASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 AC002550.2-201ENST00000621246 394 ntBASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 AL360181.4-201ENST00000621752 134 ntBASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 AC011460.1-201ENST00000636268 1834 ntBASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 AC005832.2-201ENST00000538921 1430 ntBASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HDAC9Q9UKV0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 RNA5SP295-201ENST00000362655 121 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 RNY4P34-201ENST00000364779 95 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 SNORD17-201ENST00000390930 237 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AL671855.1-201ENST00000446875 1203 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC093899.1-201ENST00000457984 376 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 RPL23AP62-201ENST00000463396 453 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC055855.1-201ENST00000489563 579 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 HMGB3P15-201ENST00000507326 574 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 SETP2-201ENST00000553886 926 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AL356432.3-201ENST00000568952 465 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 MIR3682-201ENST00000581338 84 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC060771.1-201ENST00000582031 164 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC011468.4-201ENST00000603942 409 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 U4.6-201ENST00000621618 127 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC068137.3-201ENST00000639191 341 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 AC073869.6-201ENST00000640656 341 ntBASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC9Q9UKV0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 SRP72P2-201ENST00000344851 1979 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 RNU6-50P-201ENST00000362356 103 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 RNA5SP432-201ENST00000362480 116 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 RPS3AP36-201ENST00000398190 775 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 RNU6-195P-201ENST00000411352 109 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 DUTP6-201ENST00000425573 462 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 OR2B8P-201ENST00000432841 938 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 SETP5-201ENST00000437270 562 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC093392.2-201ENST00000450682 337 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AF213884.2-201ENST00000510417 903 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC126177.3-201ENST00000551839 688 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AP001094.1-201ENST00000579805 193 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 MIR3118-1-201ENST00000581787 76 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 BX664608.1-201ENST00000610519 487 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC136475.10-201ENST00000620253 385 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AC110994.2-201ENST00000635481 492 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 OR5AK4P-201ENST00000635912 903 ntBASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDAC9Q9UKV0 RNU4-1-201ENST00000363925 141 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 DEFB109C-201ENST00000382575 264 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 DEFB109B-201ENST00000382656 264 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 RNU6-114P-201ENST00000384704 105 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 RNA5SP129-201ENST00000410276 118 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 RNU2-47P-201ENST00000410649 186 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 MTND1P1-201ENST00000445453 368 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms